Alternatives and similar repositories for ML

Users that are interested in ML are comparing it to the libraries listed below

• jmzeng1314 / ChIP-seq-analysis
  ChIP-seq analysis notes from Tommy Tang
  ☆19Updated 9 years ago
• YutingPKU / SingleCell-Multiomics
  ☆71Updated 3 years ago
• jmzeng1314 / myScRNA-seq
  ☆14Updated 8 years ago
• jmzeng1314 / METABRIC
  ☆45Updated 6 years ago
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated last year
• jmzeng1314 / IDmap
  ☆12Updated 6 years ago
• jmzeng1314 / BPscRNAseq
  ☆10Updated 7 years ago
• jmzeng1314 / GSE76275-TNBC
  ☆17Updated 5 years ago
• gatelabNW / csf_aging
  Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment
  ☆28Updated 2 years ago
• youqiongye / HAMFA
  Hypoxia associated molecular feature analysis
  ☆35Updated 6 years ago
• jmzeng1314 / TCGA_BRCA
  ☆47Updated 6 years ago
• jmzeng1314 / mouse-xx-xy-C1
  ☆18Updated 6 years ago
• BaderLab / singleLiverCells
  Scripts for processing single liver cells RNA-Seq 10X Genomics Data
  ☆26Updated 7 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆47Updated last year
• Japrin / sscClust
  simpler single cell RNAseq data clustering
  ☆42Updated 8 months ago
• jmzeng1314 / TF_map
  ☆13Updated 4 years ago
• MSZaki / Aging-and-CR-rat-atlas
  Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…
  ☆29Updated 5 years ago
• BioinformaticsFMRP / PanCanStem_Web
  ☆32Updated 3 years ago
• cssmillie / ulcerative_colitis
  ☆63Updated 5 years ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆18Updated 6 years ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆20Updated 6 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆60Updated 2 years ago
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆41Updated 2 years ago
• songw01 / MEGENA
  Multiscale embedded gene co-expression network analysis
  ☆56Updated last year
• GreenleafLab / 10x-scATAC-2019
  Publication Page for Satpathy*, Granja* et al 2019
  ☆95Updated 5 years ago
• foreverdream2 / dysfunction_interaction_test
  ☆30Updated 7 years ago
• GIS-SP-Group / RCA
  R package for robust clustering of single cell RNA sequencing data
  ☆40Updated 2 years ago
• jmzeng1314 / myTCGA
  It's just a personal record for studying how to analysis TCGA data(expression+mutation+methylation+CNV)
  ☆20Updated 8 years ago
• xjsun1221 / RSEM_with_limma_edgeR_Deseq2
  ☆37Updated 5 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated 6 months ago