Alternatives and similar repositories for BioinfoHub

Users that are interested in BioinfoHub are comparing it to the libraries listed below

• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• PSSUN / CircCode
  A Python3-base pipeline for translated circular RNA(circRNA) identification
  ☆19Updated 2 months ago
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated last month
• CBC-UCONN / RNA-seq-with-reference-genome-and-annotation
  ☆23Updated 10 months ago
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 3 years ago
• nf-core / dualrnaseq
  Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.
  ☆25Updated 6 months ago
• HuaZou / bioinformatics_pipeline
  Bioinformatics Pipeline
  ☆12Updated 3 years ago
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 6 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 6 years ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last month
• Shicheng-Guo / HowtoBook
  Readme
  ☆10Updated 5 years ago
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆15Updated 3 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated 3 weeks ago
• bernatgel / regioneR
  An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
  ☆13Updated 7 months ago
• ohlerlab / RiboseQC
  Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
  ☆19Updated 2 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• battle-lab / twn_tsn
  Transcriptome-wide network
  ☆16Updated 6 years ago
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆28Updated 3 years ago
• ipw012 / RIVER
  R package for RIVER (RNA-Informed Variant Effect on Regulation)
  ☆12Updated 5 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 6 years ago
• ShixiangWang / sigflow
  Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow
  ☆29Updated last year
• Baldridge37 / RNAseq_with_Hisat2_stringtie
  RNAseq analysis with Hisat2, stringtie, and ballgown
  ☆17Updated 6 years ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆29Updated 2 years ago
• shijianasdf / UsualRcode
  bioinformatics R test code
  ☆14Updated 3 months ago
• jokergoo / KeywordsEnrichment
  ☆31Updated 2 years ago
• smithlabcode / riborex
  Riborex: Fast and flexible identification of differential translation from Ribo-seq data
  ☆11Updated 4 years ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 7 years ago
• openbiox / Awesome-Bioinformatics-Workflow-Chinese
  Openbiox 翻译小组发起并维护的优秀 Workflow 翻译项目
  ☆27Updated 5 years ago
• GordonLab / riesling-pipeline
  RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)
  ☆10Updated 7 years ago