spyros-lytras / dinuqLinks
The Dinucleotide Quantification Python Package
☆11Updated 3 years ago
Alternatives and similar repositories for dinuq
Users that are interested in dinuq are comparing it to the libraries listed below
Sorting:
- Protein Alignment and Detection Interface☆60Updated last year
- Influenza genome analysis Nextflow workflow☆28Updated last month
- ☆31Updated 3 years ago
- ☆27Updated 5 years ago
- ☆18Updated 4 years ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- Workflow for viral analysis guided by reference☆14Updated last week
- Metagenome analysis using the Kraken software suite☆35Updated 3 years ago
- ☆24Updated 6 months ago
- A metagenomic strategy for harnessing the chemical repertoire of the human microbiome☆33Updated 4 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 4 months ago
- ☆17Updated last year
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- This program dereplicates and/or filter nucleotide and/or protein database from a list of names or sequences (by exact match).☆15Updated 6 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 4 years ago
- Visualization of the pan-genome output by panX☆64Updated 4 months ago
- Automatically exported from code.google.com/p/prank-msa☆28Updated 6 months ago
- A selection of short scripts for analyzing microbial genomes☆14Updated 7 years ago
- Detection of incorrectly labeled sequences across kingdoms☆85Updated 2 years ago
- Combining de novo and reference-guided assembly with Scaffold_builder☆20Updated 4 years ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Updated 5 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆36Updated last year
- Multilocus sequence typing by blast using the schemes from PubMLST☆30Updated 3 years ago
- A package to annotate protein sequences☆60Updated 7 months ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago
- A QIIME 2 plugin for interaction with the Greengenes2 database☆33Updated last year
- A snakemake workflow for metagenomic projects☆14Updated 2 years ago