Alternatives and similar repositories for dinuq

Users that are interested in dinuq are comparing it to the libraries listed below

• peterk87 / nf-flu
  Influenza genome analysis Nextflow workflow
  ☆31Updated 2 months ago
• martin-steinegger / kraken-protocol
  Metagenome analysis using the Kraken software suite
  ☆35Updated 3 years ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆60Updated last year
• ecbush / xenoGI
  Code for detecting genomic island insertions in clades of microbes.
  ☆19Updated 2 years ago
• peng-ye / MetaPGN
  A pipeline for construction and graphical visualization of annotated pangenome networks.
  ☆17Updated 7 years ago
• gamcil / clustermap.js
  ☆31Updated 4 years ago
• 01life / ViromeFlowX
  ☆10Updated last month
• evolbioinfo / booster
  ☆27Updated 5 years ago
• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆86Updated 3 years ago
• JLSteenwyk / orthohmm
  Improved Inference of Ortholog Groups using Hidden Markov Models
  ☆37Updated 2 months ago
• balabanmetin / uDance
  ☆42Updated last year
• niemasd / ViralMSA
  Reference-guided multiple sequence alignment of viral genomes
  ☆70Updated 3 weeks ago
• neherlab / treetime_examples
  A collection of documented examples using TreeTime
  ☆22Updated 6 years ago
• metageni / Scaffold_builder
  Combining de novo and reference-guided assembly with Scaffold_builder
  ☆20Updated 4 years ago
• alexcritschristoph / MicrobialGenomicsScripts
  A selection of short scripts for analyzing microbial genomes
  ☆14Updated 7 years ago
• wclose / viralMetagenomicsPipeline
  Pipeline for metagenomic community analysis using DNA isolated from virus-like particles
  ☆13Updated 5 years ago
• neherlab / pan-genome-visualization
  Visualization of the pan-genome output by panX
  ☆65Updated 5 months ago
• yangfangs / physpetools
  PhySpeTree: an automated pipeline for reconstructing phylogenetic species trees
  ☆14Updated last year
• ariloytynoja / prank-msa
  Automatically exported from code.google.com/p/prank-msa
  ☆29Updated last week
• segrelab / MiCoNE
  The Microbial Co-occurrence Network Explorer
  ☆21Updated 2 years ago
• biocore / q2-greengenes2
  A QIIME 2 plugin for interaction with the Greengenes2 database
  ☆33Updated last year
• TheSEED / RASTtk-Distribution
  KBase distribution module for RASTtk.
  ☆13Updated 5 years ago
• carnegie / PlantClusterFinder
  ☆17Updated last week
• Adapsyn / prism-4-paper
  ☆18Updated 4 years ago
• donia-lab / MetaBGC
  A metagenomic strategy for harnessing the chemical repertoire of the human microbiome
  ☆33Updated 3 weeks ago
• AnWiercze / NanopoReaTA
  Nanopore Real-Time Analysis Tool
  ☆15Updated last year
• BolognaBiocomp / deepsig
  DeepSig - Predictor of signal peptides in proteins based on deep learning
  ☆26Updated 2 years ago
• lozuponelab / AMON
  Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…
  ☆23Updated last year
• Ecogenomics / gtdb-species-clusters
  Toolkit for establishing, updating, and validating GTDB species clusters
  ☆20Updated last month
• bhattlab / phanta
  Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes
  ☆66Updated 2 months ago