rahi-lab / YeaZ-GUILinks
An interactive tool for segmenting yeast cells using deep learning.
☆28Updated this week
Alternatives and similar repositories for YeaZ-GUI
Users that are interested in YeaZ-GUI are comparing it to the libraries listed below
Sorting:
- Community-contributed and experimental CellProfiler modules.☆70Updated 2 weeks ago
- Microscopy Image Cytometry Toolkit☆114Updated 3 years ago
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆98Updated 2 years ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- The ImageJ plugin to run deep-learning models☆98Updated last month
- The Fluorescent Protein Database☆75Updated this week
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆186Updated this week
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- CellProfiler tutorial pipelines and images☆98Updated last month
- Cell tracking using TensorFlow and BayesianTracker☆22Updated 3 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 7 months ago
- CytoData 2016 – origin story☆18Updated 8 years ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- Open-source software for exploring and analyzing large, high-dimensional image-derived data.☆167Updated 4 months ago
- Open source Python library for building bioimage analysis pipelines☆187Updated this week
- Morphological features from images and masks made easy.☆38Updated last month
- Manual, source-code and binaries for the NanoJ-Fluidics project☆51Updated 3 years ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆48Updated 10 months ago
- Python package for processing image-based profiling data☆128Updated 3 weeks ago
- This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…☆55Updated 5 years ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆79Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated 2 years ago
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 5 years ago
- Tool for segmentation in bioimaging☆34Updated this week
- Smooth 2D manifold extraction from 3D image stack☆21Updated 7 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 2 months ago
- Advanced Tool for Labeling And Segmentation☆39Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Lectures for a napari training course☆51Updated 2 years ago