Advanced Tool for Labeling And Segmentation
☆40Oct 21, 2024Updated last year
Alternatives and similar repositories for labkit-ui
Users that are interested in labkit-ui are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Apr 23, 2026Updated last week
- MultiModal Big Image Data Sharing and Exploration☆19Jan 13, 2023Updated 3 years ago
- The framework for quantification of neuronal anatomy☆59Updated this week
- The repository of NEUBIAS textbook 2021☆11Jan 24, 2022Updated 4 years ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆22Nov 24, 2025Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆63Oct 27, 2024Updated last year
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- python tools for BigDataViewer☆22Dec 29, 2024Updated last year
- Joint training of denoising and segmentation.☆76Aug 29, 2023Updated 2 years ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆36Apr 15, 2026Updated 2 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆61Updated this week
- Connecting Java/ImgLib2 + Python/NumPy☆31Feb 9, 2026Updated 2 months ago
- An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)☆13Dec 7, 2022Updated 3 years ago
- Mistral-java-client is a client for the Mistral.ai API. It allows you to easily interact with the Mistral AI models. Currently supports a…☆12Jul 28, 2025Updated 9 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Oct 21, 2022Updated 3 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Jun 3, 2022Updated 3 years ago
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 3 years ago
- ImgLib2 RealTransform brought to QuPath☆31Mar 12, 2026Updated last month
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆16Jun 2, 2025Updated 11 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆243Apr 24, 2026Updated last week
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- sciview is a tool for visualization and interaction with ND image and mesh data☆74Feb 26, 2026Updated 2 months ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Apr 22, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 2 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Updated this week
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Jan 6, 2026Updated 3 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆27Sep 26, 2024Updated last year
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Jan 24, 2022Updated 4 years ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆21Apr 20, 2026Updated last week
- StarDist plugin for ImageJ☆31May 9, 2022Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 3 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Commands and Classes for interfacing between Imaris and Fiji☆13Apr 20, 2026Updated last week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆18Apr 20, 2026Updated last week
- TrackMate is your buddy for your everyday tracking.☆235Mar 25, 2026Updated last month
- GPU-accelerated Image Processing library for C++☆16Updated this week
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆41Mar 26, 2026Updated last month
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Jan 11, 2022Updated 4 years ago
- StarDist - Object Detection with Star-convex Shapes☆1,209Feb 14, 2026Updated 2 months ago