Alternatives and similar repositories for vcfR_documentation

Users that are interested in vcfR_documentation are comparing it to the libraries listed below

• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 6 months ago
• imbforge / NGSpipe2go
  a set of NGS pipelines
  ☆24Updated last week
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 5 months ago
• mrcuizhe / interacCircos
  An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot
  ☆28Updated 3 years ago
• bartongroup / RATS
  Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.
  ☆34Updated 3 years ago
• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• NBISweden / workshop-mlbiostatistics
  Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
  ☆16Updated 4 months ago
• kevinblighe / Awesome-Bioinformatics-Benchmarks
  A curated list of bioinformatics bench-marking papers and resources.
  ☆15Updated 5 years ago
• Bioconductor / GenomicFeatures
  Query the gene models of a given organism/assembly
  ☆27Updated this week
• EI-CoreBioinformatics / portcullis
  Splice junction analysis and filtering from BAM files
  ☆42Updated 3 years ago
• griffithlab / VAtools
  A set of tools to annotate VCF files with expression and readcount data
  ☆29Updated 7 months ago
• YaoLab-Bioinfo / intansv
  Integrative analysis of structural variations.
  ☆40Updated last year
• smshuai / DriverPower
  DriverPower
  ☆26Updated 9 months ago
• cortes-ciriano-lab / ReConPlot
  ☆23Updated 10 months ago
• guigolab / bamstats
  A command line tool to compute mapping statistics from a BAM file
  ☆25Updated 3 years ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆46Updated 2 weeks ago
• thelovelab / rnaseqDTU
  RNA-seq workflow: differential transcript usage
  ☆23Updated 2 years ago
• js2264 / tidyCoverage
  ☆22Updated last week
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆36Updated last year
• battle-lab / twn_tsn
  Transcriptome-wide network
  ☆16Updated 6 years ago
• smped / ngsReports
  ☆23Updated last month
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated this week
• Xinglab / rMATS-long
  ☆33Updated 10 months ago
• d3b-center / annoFuse
  Filter and prioritize fusion calls
  ☆20Updated last year
• umccr / umccrise
  DRAGEN Tumor/Normal workflow post-processing
  ☆23Updated 2 years ago
• eblancoga / seqcode
  Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data
  ☆19Updated 3 years ago
• HenrikBengtsson / TopDom
  R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes
  ☆21Updated 2 years ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆34Updated last week
• camoragaq / BrumiR
  BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.
  ☆11Updated 3 years ago
• XiDsLab / TAGET
  ☆20Updated 3 years ago