qbic-pipelines / vcftomafLinks
Nextflow pipeline to convert VCF files into MAF files.
☆9Updated 3 months ago
Alternatives and similar repositories for vcftomaf
Users that are interested in vcftomaf are comparing it to the libraries listed below
Sorting:
- The Zavolab Automated RNA-seq Pipeline☆35Updated 2 weeks ago
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 5 years ago
- ☆21Updated last week
- ☆9Updated 9 months ago
- PRSKB is a website and command-line interface tool for calculating polygenic risk scores using GWA studies from the NHGRI-EBI Catalog.☆29Updated 11 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆34Updated last week
- ☆14Updated 10 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆71Updated 4 months ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆44Updated last month
- Genomic data interpretation and visualization Workshop☆21Updated 2 weeks ago
- Monitor computational workflows in real time☆74Updated last year
- Gene Fusion Visualiser☆51Updated 2 years ago
- Tool suite for HGVS variant descriptions☆44Updated last month
- Tools for making plots of genomic datasets in a genome-browser-like format☆32Updated 8 months ago
- Interactive multiscale visualization for structural variation in human genomes☆70Updated last week
- A Python library to visualize and analyze long-read transcriptomes☆62Updated 3 months ago
- Config files used to define parameters specific to compute environments at different Institutions☆103Updated last week
- ☆6Updated 5 years ago
- Python package to analyze DNA methylation data☆43Updated 8 months ago
- Ultra-fast 5' and 3' demultiplexer☆27Updated last year
- Builds a PEP from SRA or GEO accessions☆52Updated 3 weeks ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Project Manager for NGS data analysis☆31Updated 2 years ago
- A python package and a set of shell commands to handle GTF files☆49Updated last year
- This repository contains Jupyter Notebooks containing GATK Best Practices Workflows☆26Updated 5 years ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆80Updated this week
- Reference genome resource manager☆75Updated last year
- Making bioinformatics fun again☆75Updated 2 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆55Updated 2 months ago
- Access nextflow variables from python scripts or notebooks☆21Updated 4 years ago