Gencode UTR fix
☆17Jan 11, 2023Updated 3 years ago
Alternatives and similar repositories for gencode_utr_fix
Users that are interested in gencode_utr_fix are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆40Nov 8, 2023Updated 2 years ago
- A Python library to visualize and analyze long-read transcriptomes☆69Jan 19, 2026Updated 9 months ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆17Jan 11, 2024Updated 2 years ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆70Updated this week
- Numerical Run Length Encoding and Arithmetic in Cython☆19Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Isoform co-usage networks from single-cell RNA-seq data☆18Feb 21, 2024Updated 2 years ago
- FlashRNA - An Efficient Model for Regulatory Genomics☆19Oct 15, 2025Updated last year
- ☆11Sep 20, 2022Updated 4 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 3 years ago
- Iso-Seq reads simulator for PacBio and ONT full-length isoform sequencing technologies☆16Mar 1, 2022Updated 4 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆51May 26, 2026Updated 5 months ago
- Quantification of isoform usage and alternative polyadenylation (APA) from single-cell RNA-seq using a Nextflow-based pipeline.☆37Nov 6, 2025Updated 11 months ago
- Tissue-specific variant effect predictions on splicing☆44May 23, 2023Updated 3 years ago
- Bam to Pandas DataFrame, quickly☆13May 10, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆16Apr 4, 2024Updated 2 years ago
- ☆39Apr 25, 2023Updated 3 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆20Apr 24, 2024Updated 2 years ago
- ☆31Nov 28, 2024Updated last year
- ☆46Oct 11, 2026Updated 2 weeks ago
- Aggregation and analyses of rare CNVs across diseases☆15Jan 25, 2023Updated 3 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆25Feb 28, 2023Updated 3 years ago
- Visualizing transcript structure and annotation using ggplot2☆171Aug 24, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆13Oct 5, 2026Updated 3 weeks ago
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆35Aug 13, 2026Updated 2 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆35Oct 27, 2018Updated 8 years ago
- ☆13Apr 16, 2026Updated 6 months ago
- Javascript package for embedding sequence logos☆19Jun 16, 2025Updated last year
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 3 years ago
- ☆10Jan 27, 2025Updated last year
- Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles☆15Aug 3, 2017Updated 9 years ago
- multi-tool QC for minion data☆11May 28, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- Sashimi plots for RNA-seq data using detected transcripts☆35Sep 4, 2026Updated last month
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- Workflow for Nanopore Sequencing of 10x single cell libraries☆19Mar 20, 2025Updated last year
- A versatile method for systematic identification of differential RNA splicing across platforms☆16Oct 16, 2026Updated 2 weeks ago
- Repository to store machine learning, artificial intelligence, and deep learning implementations with explanations☆10Apr 17, 2018Updated 8 years ago
- 🤖 Open‑source deep-learning-based splice ‑site predictor that decodes splicing patterns across species☆55Updated this week