Fast genomics quality control tools for sequencing data, written in Rust.
☆124Sep 7, 2026Updated last week
Alternatives and similar repositories for RustQC
Users that are interested in RustQC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A manifesto for AI-assisted modernisation of bioinformatics software.☆55Aug 24, 2026Updated 3 weeks ago
- Repository for edgePython which is a Python implementation of the Bioconductor edgeR package for differential analysis of genomics count …☆94Aug 21, 2026Updated 3 weeks ago
- Spiritual successor to picard for sequencing qc☆62Jul 19, 2026Updated 2 months ago
- Identify which human reference genome was used to align a BAM/SAM/CRAM file☆33Jul 19, 2026Updated 2 months ago
- fastVEP: High-performance Variant Effect Predictor in Rust☆149Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Rust library and command line tool for working with genomic ranges and their data.☆103May 29, 2024Updated 2 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 9 months ago
- GFA visualization tool - Rust reimplementation of odgi viz☆15May 2, 2026Updated 4 months ago
- long read RNA-seq quantification☆124Aug 19, 2026Updated last month
- Successor of bwa-mem for short-read alignment☆347Aug 13, 2026Updated last month
- ☆29Aug 15, 2026Updated last month
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆33Aug 13, 2026Updated last month
- Container class to represent genomic locations and support genomic analysis☆27Updated this week
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆103Nov 24, 2025Updated 9 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Easy genomic regions for short-read variant calling☆46Sep 10, 2025Updated last year
- an API for intersections of genomic data☆149Updated this week
- A high-performance BigWig and BigBed library in Rust☆126Aug 14, 2026Updated last month
- Rust-based sra-tools☆73Updated this week
- Creating alignment plots from bam files☆135Updated this week
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆200Updated this week
- Joint structural variant and copy number variant caller for HiFi sequencing data☆82Nov 4, 2025Updated 10 months ago
- Blazingly fast, streaming duplicate detection for NGS data☆21Aug 24, 2026Updated 3 weeks ago
- Efficient querying of biological databases☆45Oct 27, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- expressions on VCFs☆93Mar 17, 2026Updated 6 months ago
- genome annotation (RNAseq and TE) pipeline (draft)☆13Updated this week
- High-performance UMI tools for NGS data analysis☆55Updated this week
- AnnData interoperability in R☆196Updated this week
- Command line scientific data management tool☆229Nov 4, 2024Updated last year
- Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.☆483Sep 7, 2026Updated last week
- A terminal UI for monitoring Snakemake workflows☆23Jul 20, 2026Updated 2 months ago
- Ultra-fast preprocessing and quality control for long-read sequencing data☆238Sep 11, 2026Updated last week
- Run a command and report its process tree's CPU, memory, and I/O usage☆21Sep 8, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 5 months ago
- machine-readable file format for genomic library sequence and structure☆131Jul 15, 2026Updated 2 months ago
- Multithreaded read analysis☆25May 24, 2026Updated 3 months ago
- Builds a PEP from SRA or GEO accessions☆55Apr 12, 2026Updated 5 months ago
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆29Updated this week
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆29Updated this week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆45Jul 10, 2026Updated 2 months ago