A rust implementation of STAR
☆52Jul 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for rustar-aligner
Users that are interested in rustar-aligner are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆27Jun 25, 2026Updated 3 weeks ago
- High-performance UMI tools for NGS data analysis☆47Updated this week
- ☆21Dec 26, 2025Updated 6 months ago
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 7 months ago
- Configure Vitessce using existing Scverse plotting APIs☆25Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast array utilities☆15Updated this week
- Run a command and report its process tree's CPU, memory, and I/O usage☆21Updated this week
- Repository for edgePython which is a Python implementation of the Bioconductor edgeR package for differential analysis of genomics count …☆88Jun 17, 2026Updated last month
- ☆18Updated this week
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆45Updated this week
- ☆29Apr 13, 2026Updated 3 months ago
- Single-cell analysis methods in Rust☆34Jun 26, 2026Updated 3 weeks ago
- Successor of bwa-mem for short-read alignment☆304Updated this week
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17May 21, 2026Updated 2 months ago
- A Python package for unsupervised analysis of spatial (prote)omics data.☆17Updated this week
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries☆46Jul 8, 2026Updated last week
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆142Feb 14, 2025Updated last year
- ☆19Updated this week
- An extensible and performant aligner and read mapper☆98Updated this week
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆184Updated this week
- ☆19Jun 3, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆103Nov 24, 2025Updated 7 months ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- Identify which human reference genome was used to align a BAM/SAM/CRAM file☆33Updated this week
- an API for intersections of genomic data☆148Mar 12, 2026Updated 4 months ago
- Spiritual successor to picard for sequencing qc☆55Updated this week
- Genome browser hub for the T2T genomes and resources☆29Apr 7, 2026Updated 3 months ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- ☆31May 19, 2026Updated 2 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆14Jul 12, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Catalogue of pairwise alignment algorithms and benchmarks☆26Jan 6, 2026Updated 6 months ago
- bioinformatics toolkit in rust☆107Updated this week
- The D4 Quantitative Data Format☆173Nov 28, 2025Updated 7 months ago
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 4 months ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆39Mar 25, 2026Updated 3 months ago
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago