GIST-CSBL / HoTSLinks
HoTS: Sequence-based prediction of binding regions and drug-target interactions.
☆26Updated 2 years ago
Alternatives and similar repositories for HoTS
Users that are interested in HoTS are comparing it to the libraries listed below
Sorting:
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆30Updated last year
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- pyFoldX: python bindings for FoldX.☆48Updated 4 years ago
- ☆24Updated 7 months ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆20Updated 3 years ago
- ☆23Updated 4 years ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆24Updated 2 years ago
- Python package to atom map, correct and suggest enzymatic reactions☆40Updated last year
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 2 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 3 months ago
- ☆27Updated 9 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- Material to run the HADDOCK antibody-antigen modelling protocol☆22Updated last year
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆26Updated last year
- ☆71Updated 4 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆25Updated last year
- ☆25Updated 3 years ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 6 months ago
- ☆17Updated 3 years ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆32Updated 4 months ago
- ☆20Updated 3 years ago
- Drug-target binding affinity prediction using representation learning, graph mining, and machine learning☆24Updated 3 years ago
- ☆49Updated 8 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- Scoring methods for predicting the DDG upon protein mutation☆14Updated 2 years ago
- ☆33Updated last year