GIST-CSBL / HoTS
HoTS: Sequence-based prediction of binding regions and drug-target interactions.
☆26Updated 2 years ago
Alternatives and similar repositories for HoTS:
Users that are interested in HoTS are comparing it to the libraries listed below
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆32Updated 9 months ago
- Drug-target binding affinity prediction using representation learning, graph mining, and machine learning☆24Updated 2 years ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 7 months ago
- ☆68Updated 4 years ago
- ☆31Updated last year
- ☆20Updated 2 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆27Updated 3 years ago
- ☆21Updated 10 months ago
- Official Implementation of CompassDock☆18Updated 4 months ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 10 months ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆19Updated 7 months ago
- ChEMBL Database used to create Lipinski Descriptors (ADME Pharmokinetic Profile) to use in a Random Forest Regression Model☆13Updated 4 years ago
- Transformer Based Language Model for Peptide Property Prediction☆37Updated 6 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- ☆37Updated 4 months ago
- PocketDTA☆23Updated 3 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆35Updated 10 months ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 2 years ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆25Updated 4 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆34Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆23Updated 7 months ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆11Updated last year
- dMaSIF implementation for google colab☆30Updated last year
- Machine learning models for antibody sequences in PyTorch☆38Updated 3 years ago
- A Python 3 version of the protein descriptor package propy☆40Updated 2 years ago
- ☆17Updated 2 years ago
- Repo contains source code of the SurfaceID paper☆19Updated 11 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago