clauswilke / PeptideBuilder

Related projects ⓘ

Alternatives and complementary repositories for PeptideBuilder

• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆79Updated 2 months ago
• maccallumlab / meld
  Modeling with limited data
  ☆54Updated last week
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆69Updated 2 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 2 years ago
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆60Updated last year
• KULL-Centre / papers
  Material from papers from KULL centre
  ☆66Updated 5 months ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆66Updated 6 months ago
• tdudgeon / simple-simulate-complex
  Simple protein-ligand complex simulation with OpenMM
  ☆73Updated last year
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆59Updated last month
• czodrowskilab / VSFlow
  ☆85Updated last year
• ChemBioHTP / EnzyHTP
  EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling
  ☆13Updated this week
• dseeliger / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆57Updated 3 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆35Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆48Updated 2 months ago
• intbio / gromacs_ff
  Trusted force field files for gromacs
  ☆40Updated 3 weeks ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆95Updated 2 months ago
• freesasa / freesasa-python
  FreeSASA Python Module
  ☆48Updated last year
• jproney / AF2Rank
  ☆95Updated last year
• MDplot / MDplot
  MDplot: Visualise Molecular Dynamics
  ☆26Updated 2 years ago
• cmbi / hssp
  Create DSSP and HSSP files
  ☆83Updated 4 months ago
• pstansfeld / MemProtMD
  ☆32Updated 3 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• paiardin / DockingPie
  A Consensus Docking Plugin for PyMOL
  ☆63Updated 5 months ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆53Updated last month
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆57Updated 3 months ago
• ccsb-scripps / ADCP
  AutoDock CrankPep for peptide and disordered protein docking
  ☆41Updated 3 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆64Updated 2 months ago
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆97Updated last year
• tiwarylab / alphafold2rave
  ☆62Updated 4 months ago
• fhh2626 / BFEE2
  binding free energy estimator 2
  ☆108Updated last week