Alternatives and similar repositories for PeptideBuilder:

Users that are interested in PeptideBuilder are comparing it to the libraries listed below

• maccallumlab / meld
  Modeling with limited data
  ☆56Updated 4 months ago
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆87Updated 6 months ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆60Updated 3 months ago
• tdudgeon / simple-simulate-complex
  Simple protein-ligand complex simulation with OpenMM
  ☆82Updated last year
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆73Updated 3 years ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆99Updated 6 months ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated 2 weeks ago
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆32Updated 11 months ago
• KULL-Centre / CALVADOS
  ☆49Updated this week
• dseeliger / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆60Updated 3 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆40Updated 2 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 6 months ago
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆71Updated last year
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆68Updated 7 months ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• freesasa / freesasa-python
  FreeSASA Python Module
  ☆51Updated last year
• KULL-Centre / papers
  Material from papers from KULL centre
  ☆67Updated 9 months ago
• intbio / gromacs_ff
  Trusted force field files for gromacs
  ☆45Updated 4 months ago
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆108Updated last year
• HITS-MBM / conan
  Analysis of contacts in molecular dynamics trajectories
  ☆42Updated 5 years ago
• jproney / AF2Rank
  ☆100Updated 2 years ago
• ChemBioHTP / EnzyHTP
  EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling
  ☆15Updated this week
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆63Updated last year
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆34Updated 2 years ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆128Updated 9 months ago
• deGrootLab / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆141Updated 3 months ago
• tiwarylab / alphafold2rave
  ☆69Updated 8 months ago
• MooersLab / pymolshortcuts
  The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…
  ☆75Updated 10 months ago