clauswilke / PeptideBuilder
A simple Python library to generate model peptides
☆80Updated 4 years ago
Alternatives and similar repositories for PeptideBuilder:
Users that are interested in PeptideBuilder are comparing it to the libraries listed below
- Modeling with limited data☆56Updated 3 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆67Updated 8 months ago
- Calculation of interatomic interactions in molecular structures☆83Updated 5 months ago
- Calculation of interatomic interactions in molecular structures☆70Updated 3 years ago
- Simple protein-ligand complex simulation with OpenMM☆80Updated last year
- Material from papers from KULL centre☆67Updated 8 months ago
- Analysis of contacts in molecular dynamics trajectories☆42Updated 5 years ago
- Software for biomolecular electrostatics and solvation calculations☆97Updated 5 months ago
- Trusted force field files for gromacs☆44Updated 3 months ago
- C-library for calculating Solvent Accessible Surface Areas☆126Updated 8 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆140Updated 2 months ago
- FreeSASA Python Module☆50Updated last year
- AutoDock CrankPep for peptide and disordered protein docking☆45Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆58Updated 3 years ago
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆67Updated 5 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆27Updated 3 weeks ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆105Updated last year
- Set of useful HADDOCK utility scripts☆51Updated 5 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆29Updated 10 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆38Updated 2 years ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆15Updated this week
- (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina☆67Updated last year
- A python toolkit for analysing membrane protein-lipid interactions.☆63Updated last year
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆59Updated 4 months ago
- A Consensus Docking Plugin for PyMOL☆67Updated 8 months ago
- ☆86Updated last year
- ☆68Updated 7 months ago