Alternatives and similar repositories for PeptideBuilder

Users that are interested in PeptideBuilder are comparing it to the libraries listed below

• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆82Updated 3 years ago
• PDBeurope / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆112Updated last year
• maccallumlab / meld
  Modeling with limited data
  ☆59Updated 4 months ago
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆132Updated 2 years ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆68Updated 5 months ago
• KULL-Centre / papers
  Material from papers from KULL centre
  ☆71Updated last year
• MooersLab / pymolshortcuts
  The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…
  ☆84Updated 2 months ago
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆89Updated last year
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆96Updated 5 months ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 7 months ago
• pstansfeld / MemProtMD
  ☆45Updated 2 weeks ago
• KULL-Centre / CALVADOS
  ☆78Updated last month
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆97Updated 2 years ago
• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆115Updated last year
• freesasa / freesasa-python
  FreeSASA Python Module
  ☆58Updated 3 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• tommyhuangthu / FASPR
  Fast, accurate, and deterministic protein side-chain packing
  ☆36Updated 8 months ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆81Updated 2 weeks ago
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆35Updated 4 months ago
• ChemBioHTP / EnzyHTP
  EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling
  ☆29Updated this week
• HITS-MBM / conan
  Analysis of contacts in molecular dynamics trajectories
  ☆44Updated 6 years ago
• wlsong / PyLipID
  A python toolkit for analysing membrane protein-lipid interactions.
  ☆67Updated 3 weeks ago
• tdudgeon / simple-simulate-complex
  Simple protein-ligand complex simulation with OpenMM
  ☆91Updated 2 years ago
• tiwarylab / alphafold2rave
  ☆69Updated last year
• paiardin / DockingPie
  A Consensus Docking Plugin for PyMOL
  ☆78Updated last year
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆164Updated this week
• reymond-group / map4
  The MinHashed Atom Pair fingerprint of radius 2
  ☆118Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆35Updated 4 years ago
• volkamerlab / opencadd
  A Python library for structural cheminformatics
  ☆103Updated 6 months ago
• drorlab / pensa
  PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
  ☆145Updated 9 months ago