clauswilke / PeptideBuilderLinks
A simple Python library to generate model peptides
☆88Updated 4 years ago
Alternatives and similar repositories for PeptideBuilder
Users that are interested in PeptideBuilder are comparing it to the libraries listed below
Sorting:
- Calculation of interatomic interactions in molecular structures☆81Updated 3 years ago
- Material from papers from KULL centre☆69Updated last year
- Modeling with limited data☆59Updated 3 months ago
- The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websear…☆82Updated 3 weeks ago
- Calculation of interatomic interactions in molecular structures☆108Updated last year
- ☆45Updated 5 months ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆67Updated 4 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆129Updated 2 years ago
- Protein and nucleic acid validation service☆87Updated last year
- FreeSASA Python Module☆56Updated 2 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆97Updated 2 years ago
- Fast, accurate, and deterministic protein side-chain packing☆36Updated 7 months ago
- Simple protein-ligand complex simulation with OpenMM☆89Updated 2 years ago
- Python interface for the RCSB PDB search API.☆65Updated 6 months ago
- Software for biomolecular electrostatics and solvation calculations☆111Updated last year
- ☆72Updated this week
- Structure prediction and design of proteins with noncanonical amino acids☆100Updated last week
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina☆52Updated 3 months ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆35Updated 2 months ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆29Updated this week
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆78Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆93Updated 4 months ago
- Analysis of contacts in molecular dynamics trajectories☆43Updated 5 years ago
- ☆70Updated last year
- Contact map analysis for biomolecules; based on MDTraj☆46Updated 9 months ago
- The MinHashed Atom Pair fingerprint of radius 2☆117Updated 2 years ago
- Structure-informed machine learning for kinase modeling☆58Updated this week
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆73Updated 6 months ago