akiyamalab / MEGADOCKLinks
An ultra-high-performance protein-protein docking for heterogeneous supercomputers
☆63Updated last year
Alternatives and similar repositories for MEGADOCK
Users that are interested in MEGADOCK are comparing it to the libraries listed below
Sorting:
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆59Updated last month
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆104Updated 4 months ago
- Set of useful HADDOCK utility scripts☆53Updated 11 months ago
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 6 months ago
- The DSSP building software☆47Updated 2 years ago
- ☆51Updated 2 weeks ago
- GTalign, high-performance protein structure alignment, superposition and search☆49Updated last week
- PyDock Tutorial☆33Updated 7 years ago
- ☆85Updated last year
- Framework for the rapid modeling glycans and glycoproteins.☆30Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- Create DSSP and HSSP files☆93Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆110Updated last year
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 3 years ago
- ☆33Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- The Swiss Army knife for carbohydrate structure validation, refinement and analysis☆30Updated last week
- ☆31Updated 3 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- an integrated tool for molecular docking and virtual screening☆70Updated 2 months ago
- RosettaDesign using PyRosetta☆32Updated 6 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆63Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆76Updated last week
- Direct coupling analysis software for protein and RNA sequences☆52Updated last month
- Toolkit for alphafold3 input and output files☆83Updated 3 weeks ago
- Predict the binding affinity of protein-protein complexes from structural data☆144Updated last week
- Efficient manipulation of protein structures in Python☆56Updated 9 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆26Updated 5 months ago