JinyuanSun / PymolFoldLinks
Protein folding in Pymol
☆109Updated 7 months ago
Alternatives and similar repositories for PymolFold
Users that are interested in PymolFold are comparing it to the libraries listed below
Sorting:
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆159Updated last month
- Code for ColabDock paper☆144Updated 3 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆116Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆186Updated 3 weeks ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated 2 years ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆142Updated last year
- Improved antibody structure-based design using inverse folding☆131Updated last week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆83Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated last month
- Making Protein Modeling Accessible to All Biologists☆118Updated this week
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆63Updated last year
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆54Updated 4 months ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆155Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆91Updated 2 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆108Updated last year
- Masif seed paper repository☆157Updated 2 years ago
- ☆123Updated 3 years ago
- ☆198Updated 2 weeks ago
- ☆68Updated 3 years ago
- Protein-ligand structure prediction☆226Updated 3 weeks ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Predict the structure of immune receptor proteins☆151Updated 7 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆156Updated last year
- Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.☆57Updated 8 months ago
- ☆73Updated 11 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆76Updated last week
- ☆137Updated last month
- ☆86Updated last month