psipred / s4pred
A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
☆53Updated 3 months ago
Alternatives and similar repositories for s4pred:
Users that are interested in s4pred are comparing it to the libraries listed below
- A domain parser for Alphafold models☆34Updated last year
- ☆49Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated last year
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 2 months ago
- ☆34Updated 5 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated last year
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆32Updated 2 years ago
- ☆25Updated 9 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆56Updated 3 months ago
- Detection of remote homology by comparison of protein language model representations☆49Updated 3 months ago
- ☆32Updated 5 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated last week
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆88Updated 6 months ago
- Python package to manage protein structures and their annotations☆42Updated last year
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆51Updated 11 months ago
- PyDock Tutorial☆30Updated 6 years ago
- Fast and accurate protein structure prediction☆50Updated 2 months ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆21Updated 3 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated 11 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆42Updated 4 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆95Updated last month
- Direct coupling analysis software for protein and RNA sequences☆50Updated last year
- Contact map alignment☆41Updated 4 years ago
- ☆19Updated 3 months ago
- Ultra-fast in-silico structure mutation☆32Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆15Updated this week
- Transmembrane proteins predicted through Language Model embeddings☆33Updated last month
- Bioinformatics and Cheminformatics protocols for peptide analysis☆40Updated 2 years ago
- ☆34Updated 2 months ago