Alternatives and similar repositories for awesome-structural-bioinformatics

Users that are interested in awesome-structural-bioinformatics are comparing it to the libraries listed below

• greener-group / progres
  Fast protein structure searching or your money back
  ☆112Updated 5 months ago
• BojarLab / glycowork
  Package for processing and analyzing glycans and their role in biology.
  ☆77Updated this week
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆54Updated 8 months ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆63Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated last year
• aqlaboratory / rgn2
  ☆107Updated last year
• mmagnus / rna-tools
  🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …
  ☆177Updated last month
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 6 years ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆53Updated 10 months ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 2 months ago
• wells-wood-research / timed-design
  Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis
  ☆59Updated last month
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆73Updated last week
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• sokrypton / seqmodels
  ☆32Updated 3 weeks ago
• spetti / SMURF
  ☆132Updated 3 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 6 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆49Updated 10 months ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆111Updated last year
• biofold / ddgun
  predict stability change upon mutation
  ☆28Updated last year
• GBLille / MassiveFold
  ☆99Updated last week
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆102Updated 2 weeks ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆80Updated last year
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆67Updated 2 years ago
• sameerkhurana10 / DSOL_rv0.2
  deep protein solubility prediction
  ☆39Updated 6 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 2 weeks ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆34Updated 2 years ago