R package to run BEAST2
☆11Dec 8, 2025Updated 2 months ago
Alternatives and similar repositories for beastier
Users that are interested in beastier are comparing it to the libraries listed below
Sorting:
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Dec 8, 2025Updated 2 months ago
- babette is an R package to work with BEAST2☆46Dec 20, 2025Updated 2 months ago
- Materials for the INF 515: Comparative Genomics course at NAU taught by Prof. Marc Tollis☆13Apr 3, 2025Updated 11 months ago
- Ebola virus surveillance☆15Aug 28, 2016Updated 9 years ago
- R package deconstructR for disintegrating plots☆18Jan 5, 2018Updated 8 years ago
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22Dec 11, 2025Updated 2 months ago
- ☆18Oct 3, 2025Updated 5 months ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Jul 24, 2019Updated 6 years ago
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- R client for Dryad web services☆26Jan 30, 2023Updated 3 years ago
- Resources for Influenza Research☆24Aug 3, 2022Updated 3 years ago
- Working with the outputs of sourmash in R☆28Jan 15, 2026Updated last month
- Simulating genealogies using charged particles☆31Apr 21, 2015Updated 10 years ago
- R Package - Download and Prepare C14 Dates from Different Source Databases☆31Nov 24, 2025Updated 3 months ago
- Tools for visualizing and comparing data from vertebrate retinas☆14Jan 20, 2025Updated last year
- Social network analysis in R and Stan☆34Nov 17, 2025Updated 3 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆36Jan 3, 2026Updated 2 months ago
- Radiocarbon calibration command line tool and Haskell module☆11Nov 24, 2025Updated 3 months ago
- Software for the Tree-Based Scan Statistic☆14Updated this week
- Official repository of pyArchInit since Python 3 porting☆13Feb 20, 2026Updated 2 weeks ago
- Lecture on viral phylodynamics☆11Oct 28, 2021Updated 4 years ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 2 years ago
- JavaScript code to be implemented in Google Earth Engine(c) developed by H.A. Orengo to accompany the paper: Orengo, H.A.; Conesa, F.C.;…☆14Dec 10, 2020Updated 5 years ago
- Post-processing MCMC Simulations for Chronological Modelling☆11Sep 29, 2025Updated 5 months ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.☆14Aug 6, 2024Updated last year
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- Minimum Bait Cover Toolkit Syotti.☆13Jan 22, 2025Updated last year
- An open-source carbon box model implementation built on JAX.☆11Apr 2, 2024Updated last year
- ☆13Apr 22, 2022Updated 3 years ago
- ☆10Dec 8, 2021Updated 4 years ago
- Bayesian estimation of the evolutionary rate matrix.☆10Dec 8, 2025Updated 2 months ago
- R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecula…☆11Feb 19, 2026Updated 2 weeks ago
- Package for species delimitation analysis☆11Jan 7, 2025Updated last year
- paleofire package☆14Dec 14, 2021Updated 4 years ago
- source code for ODATE textbook☆10Jul 11, 2020Updated 5 years ago
- ☆12Mar 11, 2025Updated 11 months ago
- Archaeological Time Series - Moved to https://codeberg.org/tesselle/aion☆10Dec 15, 2025Updated 2 months ago
- Ecological mixed-effects ordination with lme4☆12May 9, 2016Updated 9 years ago