☆15May 1, 2025Updated 11 months ago
Alternatives and similar repositories for PrimerJinn
Users that are interested in PrimerJinn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automatically design multiplex PCR primer pairs for diverse templates☆33May 23, 2024Updated last year
- A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.☆35Dec 2, 2024Updated last year
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆86Jan 24, 2026Updated 2 months ago
- Development repo for pyani-plus (the next iteration of pyani)☆30Updated this week
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Multiplex Primer Design☆12May 3, 2020Updated 5 years ago
- Searching for Horizontal Gene Transfer☆10Feb 22, 2020Updated 6 years ago
- Primer design from single genes to whole gene families for unlocking the tree of life☆16Jun 4, 2025Updated 10 months ago
- Retrieve HIVdb algorithm as XML and apply locally to HIV sequences☆13Mar 4, 2026Updated last month
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- DNA overhang misannealing data for Python☆13May 15, 2025Updated 10 months ago
- Rapidly extract reads from a FASTQ file based on taxonomic classification via Kraken2.☆13Jan 26, 2026Updated 2 months ago
- plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style☆17Dec 19, 2025Updated 3 months ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Population analysis PIPEline 🛠🧬☆23Mar 2, 2026Updated last month
- 🧬 Unique (& conserved) DNA sequence identification☆17Mar 10, 2026Updated last month
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆14Jul 30, 2024Updated last year
- DFAST Quality Control: Taxonomy and completeness check☆18Mar 25, 2026Updated 2 weeks ago
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆21Dec 9, 2025Updated 4 months ago
- Multiplex PCR design, in silico☆20Mar 4, 2025Updated last year
- Plasmid analysis using rearrangement distances☆50Mar 23, 2026Updated 2 weeks ago
- a DNA assembly library☆23Aug 13, 2025Updated 7 months ago
- A pipeline for bioinformatics analysis of bacterial genomes☆32Mar 25, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆54May 16, 2023Updated 2 years ago
- Fast and space-efficient taxonomic classification of long reads☆45Aug 25, 2025Updated 7 months ago
- ☆10May 14, 2025Updated 10 months ago
- Find Unique genomic Regions☆32Mar 18, 2026Updated 3 weeks ago
- Ultra-fast preprocessing and quality control for long-read sequencing data☆226Sep 6, 2025Updated 7 months ago
- Colony counting for CS4641☆18Jul 17, 2020Updated 5 years ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Aug 19, 2025Updated 7 months ago
- Chimera: A Versatile Metagenomic Classification Tool☆21Feb 1, 2026Updated 2 months ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Searching DNA/RNA sequence databases with PCR and/or probe queries☆23Feb 23, 2026Updated last month
- Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).☆27Apr 5, 2024Updated 2 years ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- Automated strain separation of low-complexity metagenomes☆52Nov 10, 2021Updated 4 years ago
- A functional profiler for metagenomes using FracMinHash☆21Apr 3, 2026Updated last week
- ☆13Dec 3, 2024Updated last year
- ☆30Apr 3, 2026Updated last week