Alternatives and similar repositories for flow_registration:

Users that are interested in flow_registration are comparing it to the libraries listed below

• NICALab / SUPPORT
  Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.
  ☆80Updated 2 weeks ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated 11 months ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• nel-lab / FIOLA
  ☆34Updated last year
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆25Updated last year
• Leveltlab / SpectralSegmentation
  Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences
  ☆13Updated last month
• ChristophKirst / ClearMap
  ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
  ☆53Updated 4 years ago
• adamshch / SEUDO
  ☆8Updated 3 years ago
• PrincetonUniversity / BrainPipe
  ☆18Updated 3 years ago
• morphonets / SNT
  The ImageJ framework for quantification of neuronal anatomy
  ☆48Updated last week
• BIOP / ijp-imagetoatlas
  ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)
  ☆49Updated 2 months ago
• Gubra-ApS / LSFM-mouse-brain-atlas
  ☆18Updated 3 years ago
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆25Updated 2 years ago
• ankilab / DeepD3
  ☆22Updated 2 months ago
• dterstege / FASTMAP
  ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing
  ☆21Updated 2 years ago
• adamcohenlab / invivo-imaging
  Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)
  ☆15Updated 2 years ago
• albert597 / TRAILMAP
  ☆45Updated 4 years ago
• EricThomson / CCN_caiman_mesmerize_workshop_2023
  Repo for CCN workshop on caiman and mesmerize in January 2023
  ☆13Updated 2 years ago
• bleach1by1 / BIRDS_plugin
  BIRDS plug-in on Fiji and attached jar package
  ☆18Updated 3 years ago
• bkntr / brainways
  Brainways
  ☆16Updated last week
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• alihaydaroglu / suite3d
  Fast, volumetric cell detection. In development.
  ☆17Updated last week
• lahammond / BrainJ
  Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
  ☆29Updated last year
• brainglobe / slicereg
  A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.
  ☆37Updated last year
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆81Updated 3 weeks ago
• easy-electrophysiology / easy-electrophysiology-analysis
  Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)
  ☆16Updated last month
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆40Updated this week
• golshanilab / UCLA_2P_Miniscope
  UCLA Multiphoton Miniature Microscope
  ☆11Updated 3 months ago
• cogilab / AMaSiNe
  Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…
  ☆14Updated 2 years ago
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆28Updated last month