paulstothard / sequence_manipulation_suiteLinks
A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for teaching purposes, and for program and algorithm testing.
☆81Updated 10 months ago
Alternatives and similar repositories for sequence_manipulation_suite
Users that are interested in sequence_manipulation_suite are comparing it to the libraries listed below
Sorting:
- RNA secondary structure/sequence profiles for homology search and alignment☆113Updated 10 months ago
- Fast and flexible ORF finder☆75Updated 3 years ago
- Webserver and command line tool for annotating engineered plasmids☆130Updated 2 months ago
- High-quality circular representations of taxonomic and phylogenetic trees☆104Updated last year
- Download files from NCBI Entrez by accession☆127Updated last year
- ☆131Updated last year
- A brief, quick and dirty introduction to Sequence Similarity Networks☆23Updated 2 years ago
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆222Updated this week
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆139Updated 6 months ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆250Updated last week
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 3 months ago
- BGC Detection and Classification Using Deep Learning☆153Updated last year
- MGnify genome analysis pipeline☆107Updated last month
- sensitive and precise assembly of short sequencing reads☆161Updated 11 months ago
- User-friendly software for viewing and processing Sanger DNA sequencing trace files.☆30Updated 7 years ago
- antiSMASH☆222Updated 2 weeks ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆78Updated 2 years ago
- Align multiple amino acid or nucleotide sequences.☆63Updated 5 years ago
- Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files☆114Updated this week
- Similarity networks of biosynthetic gene clusters☆129Updated 3 weeks ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆146Updated last week
- Git repository for FASTA36 sequence comparison software☆123Updated last month
- What should perfect bioinformatic tools be like?☆133Updated 4 months ago
- Logan Unitigs and Contigs☆169Updated last week
- Desktop application for colouring/shading sequence alignments☆29Updated 2 years ago
- a tool for inferring species tree from sequencing reads☆151Updated 2 weeks ago
- Antibiotic resistance prediction in minutes☆111Updated 9 months ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆101Updated last year
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆94Updated 3 years ago
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago