paulstothard / sequence_manipulation_suiteLinks
A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipulation Suite is commonly used by molecular biologists, for teaching purposes, and for program and algorithm testing.
☆74Updated 6 months ago
Alternatives and similar repositories for sequence_manipulation_suite
Users that are interested in sequence_manipulation_suite are comparing it to the libraries listed below
Sorting:
- Download files from NCBI Entrez by accession☆123Updated 9 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆110Updated 6 months ago
- Pipeline for metabolic annotation of microbial genomes☆147Updated 2 months ago
- ☆129Updated 9 months ago
- Fast and flexible ORF finder☆69Updated 3 years ago
- Similarity networks of biosynthetic gene clusters☆115Updated this week
- A brief, quick and dirty introduction to Sequence Similarity Networks☆21Updated 2 years ago
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆208Updated this week
- a tool for inferring species tree from sequencing reads☆150Updated 3 months ago
- Align multiple amino acid or nucleotide sequences.☆60Updated 4 years ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆136Updated this week
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆82Updated 6 months ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆57Updated 10 months ago
- Bioinformatics tool for Locus Visualisation☆106Updated 3 weeks ago
- Logan Unitigs and Contigs☆132Updated 3 weeks ago
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆82Updated 7 years ago
- A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences☆92Updated last year
- Workflow for Building Microsynteny Networks☆55Updated 2 years ago
- MGnify genome analysis pipeline☆106Updated last week
- What should perfect bioinformatic tools be like?☆125Updated 3 weeks ago
- PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. Please report only **techni…☆155Updated 3 weeks ago
- Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files☆110Updated 2 months ago
- Catalog of genomic indexes freely available from public clouds☆60Updated last month
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆77Updated 2 years ago
- sensitive and precise assembly of short sequencing reads☆155Updated 7 months ago
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆140Updated last week
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- ☆50Updated last year
- Webserver and command line tool for annotating engineered plasmids☆121Updated 3 months ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated last year