CGView.js creates interactive circular and linear genome maps.
☆45Apr 10, 2026Updated this week
Alternatives and similar repositories for cgview-js
Users that are interested in cgview-js are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.☆38Apr 13, 2024Updated 2 years ago
- Repo for Proksee Cmd Line Tools☆28Feb 22, 2023Updated 3 years ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆53Mar 2, 2026Updated last month
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- ☆15Feb 10, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Martini Workshop: Simulating a Minimal Bacterial Cell☆15May 13, 2024Updated last year
- A Python package to update the MLST database for the mlst tool.☆20Mar 31, 2026Updated 2 weeks ago
- 🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables☆29Feb 12, 2026Updated 2 months ago
- GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click…☆87Dec 15, 2024Updated last year
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19May 3, 2024Updated last year
- Neptune: Genomic Signature Discovery☆21Nov 20, 2024Updated last year
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Jul 26, 2022Updated 3 years ago
- Split Kmer Analysis☆66May 26, 2022Updated 3 years ago
- emm Automatic Isolate Labeller☆12Mar 25, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆22Mar 8, 2024Updated 2 years ago
- Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure☆176Feb 26, 2026Updated last month
- ☆23Oct 27, 2021Updated 4 years ago
- Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA☆28Nov 7, 2024Updated last year
- GC Skew Test for Bacterial Genomes☆32Sep 29, 2022Updated 3 years ago
- Assembly of Nanopore Sequencing☆17Jan 8, 2026Updated 3 months ago
- Calculate assocations between genes and traits☆30Mar 10, 2025Updated last year
- ☆14Oct 27, 2025Updated 5 months ago
- HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NG…☆12Sep 18, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Precise host read removal☆119Mar 28, 2026Updated 2 weeks ago
- A tooL for Prokaryotic Phylogeny And Clustering Analysis☆13Jul 28, 2025Updated 8 months ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆43Updated this week
- ProkEvo - an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses.☆18Aug 16, 2021Updated 4 years ago
- A Swiss-Army-Knife for Bioinformaticians☆15Mar 20, 2026Updated 3 weeks ago
- A collection of simple JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. The Sequence Manipu…☆88Nov 15, 2024Updated last year
- Resolving Species Level Classification Using Emu☆14Jun 14, 2024Updated last year
- ☆31Feb 6, 2026Updated 2 months ago
- Prokaryotic Pangenome Analysis☆24Dec 3, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Bacterial Annotation by Learned Representation of Genes☆60Mar 26, 2026Updated 3 weeks ago
- ☆11Sep 16, 2020Updated 5 years ago
- List and download schemes from pubMLST.org and other BIGSDB servers☆10Oct 14, 2024Updated last year
- BSR-Based Allele Calling Algorithm☆149Mar 13, 2026Updated last month
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆180Nov 17, 2025Updated 4 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆622Feb 18, 2026Updated last month
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year