A class project for CS508 from UIUC to implement the classic BLAST algorithm using different GPU computing techniques.
☆10May 16, 2023Updated 3 years ago
Alternatives and similar repositories for GPU-BLAST-plus
Users that are interested in GPU-BLAST-plus are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.☆71Oct 20, 2022Updated 4 years ago
- The binning tool with dynamic contrastive learning and deep language model☆26Oct 21, 2026Updated last week
- ☆23Jan 6, 2026Updated 9 months ago
- calculate multiple MD5 using multiple threads☆13Apr 16, 2021Updated 5 years ago
- ☆12Jun 3, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆11Dec 16, 2025Updated 10 months ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 7 years ago
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated last year
- ☆65Updated this week
- This reposatory includes all scripts necessary to calculate the GRAil-based DEscriptor (GRADE) and the eXtended GRAil-based DEscriptor (X…☆13May 17, 2026Updated 5 months ago
- jni bindings to aten from libtorch☆11Apr 20, 2025Updated last year
- Bybit Historical Market Data Downloader☆14Jun 25, 2026Updated 4 months ago
- A web scraper for collecting and processing public case records from sites using Tyler Technology's Odyssey court records database softwa…☆28Nov 26, 2024Updated last year
- Portable database of microhaplotype marker and allele frequency data☆13Oct 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Jun 22, 2026Updated 4 months ago
- WikiPathways Database☆19Oct 25, 2026Updated last week
- Chorus: Heterogeneous GPU+CPU Multiple Protein Sequences Alignment Search for Large Database☆17Apr 7, 2025Updated last year
- GPU-accelerated AES encryption project☆11Feb 13, 2015Updated 11 years ago
- genomic variant frequency estimation☆12Sep 4, 2026Updated last month
- ☆23Mar 19, 2025Updated last year
- Local and global SPMD type system supporting erasure☆10Apr 24, 2026Updated 6 months ago
- VASim is a virtual homogeneous non-deterministic finite automata automata simulator and transformation tool. VASim can parse, transform, …☆36May 17, 2024Updated 2 years ago
- ☆11Sep 27, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Chinese Colors is a VS Code Extenstion which preset colors☆13Mar 2, 2026Updated 7 months ago
- FunFlux: A dedicated workflow for fungal genome assembly from short reads, decontamination, completeness validation, and comprehensive ge…☆15Oct 7, 2026Updated 3 weeks ago
- In silico Penicillin Binding Protein (PBP) typer for Streptococcus pneumoniae assemblies☆10Aug 6, 2024Updated 2 years ago
- Auto-differentiation library for C++☆12Jan 16, 2022Updated 4 years ago
- Collections of Benchmarks of R☆11May 16, 2016Updated 10 years ago
- ☆12Jul 10, 2025Updated last year
- CS-Switch的 Linux CLI & GUI移植版,支持 CLI 命令行和 Tauri 桌面 GUI 两种使用方式☆23Jul 14, 2026Updated 3 months ago
- SwarmGenomics: A Unified Pipeline for Individual-Based Whole-Genome Analyses☆11Oct 22, 2026Updated last week
- Standardise TR/MH/IG data☆14Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 4 years ago
- ☆13Jul 22, 2021Updated 5 years ago
- A tool for typing SCCmec cassettes in assemblies☆14Aug 25, 2024Updated 2 years ago
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Jul 24, 2024Updated 2 years ago
- Accompanying Repository to TCR-TRANSLATE paper.☆12Jun 26, 2026Updated 4 months ago
- fastx-utils using klib☆19Sep 1, 2020Updated 6 years ago
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Aug 24, 2026Updated 2 months ago