DyogenIBENS / FINSURFLinks
FINSURF is a tool designed to analyse lists of sequences variants in the human genome.
☆12Updated 2 years ago
Alternatives and similar repositories for FINSURF
Users that are interested in FINSURF are comparing it to the libraries listed below
Sorting:
- ☆22Updated 6 months ago
- Immuological gene typing and annotation for genome assembly☆37Updated 3 months ago
- ☆19Updated 2 years ago
- Reconstruction of focal amplifications with long reads☆21Updated last week
- Structural variant merging tool☆52Updated 10 months ago
- ☆36Updated 2 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆30Updated last month
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last week
- ☆19Updated 2 months ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆34Updated 6 years ago
- TEspeX - pipeline for Transposable Elements expression quantification☆21Updated last year
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆23Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- ☆23Updated 4 years ago
- ☆51Updated 5 years ago
- Nanopore 3' end-capture sequencing (Begik et al., bioRxiv 2021)☆12Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Tools for processing and analyzing structural variants.☆33Updated 9 years ago
- Genotype and phase short tandem repeats using Illumina whole-genome sequencing data☆32Updated 4 years ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- Variant annotation and merging pipeline☆36Updated 3 weeks ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 7 years ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆13Updated 6 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆14Updated last year
- ☆37Updated 5 years ago