DyogenIBENS / FINSURFView external linksLinks
FINSURF is a tool designed to analyse lists of sequences variants in the human genome.
☆12Oct 24, 2022Updated 3 years ago
Alternatives and similar repositories for FINSURF
Users that are interested in FINSURF are comparing it to the libraries listed below
Sorting:
- SCCNV: a software tool for identifying copy number variation from single-cell whole-genome sequencing☆13Jul 21, 2020Updated 5 years ago
- De-novo Assembly Structural Variant Caller☆13Sep 15, 2016Updated 9 years ago
- ☆14Oct 9, 2025Updated 4 months ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Aug 6, 2025Updated 6 months ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆25Jul 15, 2022Updated 3 years ago
- SCORPiOs is a synteny-guided gene tree correction pipeline for clades that have undergone a whole-genome duplication event.☆23Sep 23, 2024Updated last year
- Complex structural variant detection from WGS data☆31Jan 10, 2025Updated last year
- SMRT-SV: Structural variant and indel caller for PacBio reads☆28Feb 21, 2019Updated 6 years ago
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆31May 12, 2020Updated 5 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Mar 5, 2018Updated 7 years ago
- Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3☆37Aug 30, 2022Updated 3 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆35Nov 27, 2024Updated last year
- Algorithm For Gene Order Reconstruction in Ancestors☆80Aug 16, 2025Updated 5 months ago
- ☆11Oct 10, 2024Updated last year
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 3 months ago
- Annotate Olfactory receptor CDS from genome☆10Apr 29, 2023Updated 2 years ago
- ☆38Dec 29, 2025Updated last month
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 4 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆34Mar 4, 2024Updated last year
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- This is the site where we store shared code for the Michigan Mycology Lab☆15Apr 10, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 6 years ago
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 4 years ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆10Feb 27, 2023Updated 2 years ago
- Store collections of experimental data based on TileDB☆12Updated this week
- Representation of Module Activity☆10May 31, 2017Updated 8 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- ☆14Oct 14, 2022Updated 3 years ago
- ☆12Aug 30, 2025Updated 5 months ago
- ☆42Sep 14, 2022Updated 3 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Nov 16, 2021Updated 4 years ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆86Jan 6, 2026Updated last month
- Annotated sequence data☆11Feb 2, 2025Updated last year
- A customizable genetic variants file format converter.☆11Oct 7, 2025Updated 4 months ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- Precursor microRNA Identification Using Deep Convolutional Neural Networks☆11Oct 31, 2018Updated 7 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Oct 15, 2025Updated 3 months ago