painyeph / FishersExactTest
A fast, precise, pure Python implementation of Fisher's exact test
☆12Updated 8 years ago
Alternatives and similar repositories for FishersExactTest:
Users that are interested in FishersExactTest are comparing it to the libraries listed below
- Genome Contact Map Explorer - gcMapExplorer. Visit:☆21Updated 3 years ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 2 years ago
- Blazing fast toolkit to work with .hic and .cool files☆29Updated this week
- ☆9Updated 10 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆24Updated 10 months ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆37Updated last year
- snakemake pipeline for Hi-C post-processing☆22Updated 9 months ago
- new repo☆28Updated 3 years ago
- Interactive tutorials for using scikit-bio in biological research☆24Updated 8 months ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆10Updated last year
- HiCSR: a Hi-C super-resolution framework for producing highly realistic contact maps☆13Updated 2 years ago
- Iso-Seq reads simulator for PacBio and ONT full-length isoform sequencing technologies☆12Updated 3 years ago
- ☆20Updated 3 weeks ago
- Transcription Factor Enrichment Analysis☆34Updated last month
- POSTRE: Prediction Of STRuctural variant Effects☆21Updated last month
- Python3 module for running MUMmer and reading the output☆31Updated last week
- ☆28Updated last year
- We developed a protocol of in situ high throughput multi-way contact long read Pore-C sequencing (in situ HiPore-C), a strategy that inte…☆19Updated last year
- The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …☆10Updated last year
- Read, parse and operate different multiple input file formats with OpenVariant☆12Updated 2 weeks ago
- Lightweight converter between hic and cool contact matrices.☆68Updated 8 months ago
- ☆38Updated 6 months ago
- Genomics 3D Visualizer☆12Updated 9 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆52Updated 2 months ago
- ☆33Updated 2 years ago
- ☆18Updated 3 weeks ago
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆41Updated 2 years ago
- Deep learning embedding for nucleotide sequences☆17Updated this week
- A genome browser in your Jupyter notebook☆30Updated 3 months ago
- Python reimplementation of hicrep with compatibility for sparse matrices☆17Updated 2 years ago