jordanlab / tagoreLinks
The script presents a simple way to visualize features on human chromosome ideograms
☆43Updated 8 months ago
Alternatives and similar repositories for tagore
Users that are interested in tagore are comparing it to the libraries listed below
Sorting:
- TIDDIT - structural variant calling☆78Updated 3 weeks ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Updated 2 years ago
- ☆44Updated last year
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 4 months ago
- Toolkit for genome-wide analysis of tandem repeats☆58Updated 2 months ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆70Updated 3 weeks ago
- new repo☆28Updated 4 years ago
- ☆28Updated 3 months ago
- Set of tools to manipulate and visualize modified base bam files☆58Updated 3 years ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆51Updated last month
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆48Updated 5 years ago
- Merging paired-end reads and removing adapters☆30Updated 5 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- BigWig and BAM utilities☆99Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- Human reference genome analysis sets☆57Updated 2 years ago
- In-silico PCR, primer design and padlock design for in-situ sequencing☆53Updated 5 months ago
- Structural variant (SV) analysis tools☆39Updated last year
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- python plotly Circos from VCF☆40Updated last year
- MethPhaser: methylation-based haplotype phasing of human genomes☆52Updated 10 months ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆55Updated last year
- vcfdist: Accurately benchmarking phased variant calls☆85Updated 3 months ago
- Immuological gene typing and annotation for genome assembly☆38Updated 9 months ago