ciceklab / UTRGANLinks
Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression
☆21Updated 7 months ago
Alternatives and similar repositories for UTRGAN
Users that are interested in UTRGAN are comparing it to the libraries listed below
Sorting:
- TEIM: TCR-Epitope Interaction Modeling☆55Updated 2 years ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆21Updated 2 years ago
- ☆50Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆111Updated 4 months ago
- Learning the language of protein-protein interactions☆107Updated 3 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 9 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆68Updated 4 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆36Updated 5 months ago
- ☆45Updated 9 months ago
- Efficient implementatin of ESM family.☆78Updated 3 months ago
- open source code for Tencent tFold☆132Updated 9 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆61Updated 3 weeks ago
- Fitness landscapes for antibodies☆96Updated this week
- ☆73Updated 5 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated this week
- ☆54Updated last year
- ☆118Updated last year
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆42Updated last year
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆37Updated last year
- ☆91Updated last year
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 10 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆51Updated last month
- ☆20Updated 8 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆46Updated 3 months ago
- ☆54Updated 4 months ago
- Protein language model trained on coding DNA☆52Updated last year
- ☆74Updated 4 years ago
- Rapid structure-based virtual screening for RNA targets.☆23Updated last week