Alternatives and similar repositories for evo

Users that are interested in evo are comparing it to the libraries listed below

• kyegomez / AlphaFold3
  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
  ☆784Updated last week
• evolutionaryscale / esm
  ☆1,934Updated last week
• HazyResearch / hyena-dna
  Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena
  ☆683Updated last month
• google-deepmind / alphamissense
  ☆572Updated last year
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,292Updated 9 months ago
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆602Updated last week
• Ligo-Biosciences / AlphaFold3
  Open source implementation of AlphaFold3
  ☆984Updated 8 months ago
• lucidrains / alphafold3-pytorch
  Implementation of Alphafold 3 from Google Deepmind in Pytorch
  ☆1,441Updated 4 months ago
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆984Updated this week
• baker-laboratory / RoseTTAFold-All-Atom
  ☆722Updated last week
• generatebio / chroma
  A generative model for programmable protein design
  ☆739Updated last year
• instadeepai / nucleotide-transformer
  🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
  ☆622Updated this week
• Peldom / papers_for_protein_design_using_DL
  List of papers about Proteins Design using Deep Learning
  ☆1,683Updated last week
• jwohlwend / boltz
  Official repository for the Boltz-1 biomolecular interaction model
  ☆1,875Updated 3 weeks ago
• togethercomputer / stripedhyena
  Repository for StripedHyena, a state-of-the-art beyond Transformer architecture
  ☆377Updated last year
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆733Updated 3 weeks ago
• facebookresearch / esm
  Evolutionary Scale Modeling (esm): Pretrained language models for proteins
  ☆3,632Updated last year
• bytedance / Protenix
  A trainable PyTorch reproduction of AlphaFold 3.
  ☆1,162Updated this week
• sokrypton / ColabFold
  Making Protein folding accessible to all!
  ☆2,253Updated 2 weeks ago
• RosettaCommons / RFdiffusion
  Code for running RFdiffusion
  ☆2,212Updated last month
• NVIDIA / bionemo-framework
  BioNeMo Framework: For building and adapting AI models in drug discovery at scale
  ☆426Updated this week
• chaidiscovery / chai-lab
  Chai-1, SOTA model for biomolecular structure prediction
  ☆1,654Updated this week
• biotite-dev / biotite
  A comprehensive library for computational molecular biology
  ☆809Updated 2 weeks ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆709Updated last month
• agemagician / ProtTrans
  ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…
  ☆1,211Updated 2 weeks ago
• yangkky / Machine-learning-for-proteins
  Listing of papers about machine learning for proteins.
  ☆1,621Updated last year
• pinellolab / DNA-Diffusion
  🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨
  ☆392Updated last month
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,256Updated last month
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆391Updated 2 months ago
• MAGICS-LAB / DNABERT_2
  [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome
  ☆382Updated 5 months ago