☆19Dec 2, 2025Updated 10 months ago
Alternatives and similar repositories for mRNABERT
Users that are interested in mRNABERT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Jul 30, 2019Updated 7 years ago
- ☆17Jun 22, 2024Updated 2 years ago
- TemporalVAE: dual-objective VAE for time prediction in single cells☆13Sep 13, 2025Updated last year
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆25May 11, 2025Updated last year
- This repository hosts the software of GEMORNA, a generative AI tool for mRNA sequence design.☆101Nov 11, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆13Feb 7, 2023Updated 3 years ago
- State of the art software for RNA sequence design. The first to solve the Eterna benchmark!☆16Jul 17, 2024Updated 2 years ago
- 中科大2023春-智能计算系统☆11Jul 18, 2023Updated 3 years ago
- Tools for designing optimised mRNA sequences using mRNA folding algorithms☆12May 6, 2026Updated 5 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆43Sep 30, 2026Updated last month
- ☆20Aug 23, 2025Updated last year
- ☆14Dec 15, 2022Updated 3 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆21Apr 7, 2020Updated 6 years ago
- Locate transgenic insertion sites☆11Mar 14, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Altered TCR Ligand Affinities and Structures☆13Dec 1, 2023Updated 2 years ago
- ☆24Oct 2, 2024Updated 2 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM☆19Oct 23, 2026Updated last week
- Combination of the RapidFuzz library with Spacy PhraseMatcher☆11Sep 29, 2021Updated 5 years ago
- ANN server using faiss.☆14Dec 14, 2021Updated 4 years ago
- GPU-Accelerated Cosine Similarity for Tandem Mass Spectrometry☆19Nov 4, 2025Updated 11 months ago
- Models, design algorithms, and other software related to Salis lab publications☆40Aug 5, 2026Updated 2 months ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆19Jul 19, 2025Updated last year
- This is the repository for the project entitled "Revisiting K-mer Profile for Effective and Scalable Genome Representation Learning"☆11Oct 21, 2024Updated 2 years ago
- Methods for label-free mass spectrometry proteomics☆17May 13, 2026Updated 5 months ago
- Tool to manually verify 0x order hashes are correct before user signs them with metamask☆21Aug 20, 2019Updated 7 years ago
- ☆14Sep 20, 2026Updated last month
- A Foundation Language Model For Multilayer Regulation of RNA☆15Nov 5, 2025Updated 11 months ago
- ☆11Sep 22, 2021Updated 5 years ago
- ☆11Jun 24, 2024Updated 2 years ago
- Source code of ProDMM. The paper is titled with "Unveiling Protein-DNA Interdependency: Harnessing Unified Multimodal Sequence Modeling, …☆10Oct 12, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Fast, sensitive and accurate protein remote homology search on GPUs☆15May 6, 2024Updated 2 years ago
- Full-length linear and circular transcript isoform reconstruction and quantification☆11Jun 17, 2024Updated 2 years ago
- Find common blocks and differences between DNA sequences☆46Nov 5, 2025Updated 11 months ago
- k-mer probability logo☆12Oct 24, 2026Updated last week
- Python package to load and query ARCHS4 data☆31Jul 6, 2026Updated 3 months ago
- Official Repository for ICML 2026 paper Coevolutionary Continuous Discrete Diffusion: Make Your Diffusion Language Model a Latent Reasone…☆14May 21, 2026Updated 5 months ago
- Lifelong Learning of Graph Neural Networks for Open-World Node Classification☆29Oct 4, 2023Updated 3 years ago