Species-aware DNA language modeling
☆19Jan 25, 2023Updated 3 years ago
Alternatives and similar repositories for species-aware-DNA-LM
Users that are interested in species-aware-DNA-LM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Species-aware DNA language models capture regulatory elements and their evolution☆28Aug 21, 2023Updated 3 years ago
- ☆12Feb 6, 2023Updated 3 years ago
- Protein language model trained on coding DNA☆56Oct 20, 2024Updated last year
- Scripts for building computational models of gene regulation with tensorflow☆12Jan 21, 2020Updated 6 years ago
- Code for the Framepool model☆16Feb 1, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Natural Language-Based Synthetic Data Generation for Cluster Analysis.☆18Feb 23, 2025Updated last year
- ☆16Aug 18, 2026Updated last month
- This program can be used to parse the NCBI GenBank file to create a tabulated csv file.☆10Mar 4, 2019Updated 7 years ago
- Genomic Pretrained Network - GPN, GPN-MSA, PhyloGPN, GPN-Star☆381Updated this week
- ☆19Mar 21, 2024Updated 2 years ago
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 3 months ago
- Public Benchmark of Long-Read Structural Variant Caller on ONT PromethION Data☆15Nov 28, 2019Updated 6 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- SV genotyper for long reads with a variation graph☆16Apr 15, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ancestral reconstruction and likelihood analysis for CRISPR spacer arrays☆11May 7, 2025Updated last year
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆24Sep 7, 2023Updated 3 years ago
- Fast, Accurate, Lightweight Python library to make State of the Art Embedding☆20Jan 25, 2026Updated 8 months ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 4 years ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Prioritizing Copy Number Variants (CNV) using Phenotype and Gene Functional Similarity☆18Mar 10, 2022Updated 4 years ago
- A command-line tool for reading SAM/BAM files and converted them directly to bigwig files.☆25Sep 12, 2026Updated 2 weeks ago
- ☆18May 20, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python library for using the CaltechDATA API☆13Sep 11, 2026Updated 2 weeks ago
- Sandbox for Deep-Learning based Computational Protein Design☆122Aug 14, 2026Updated last month
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆134Oct 31, 2024Updated last year
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago
- Napari plugin for working with video files.☆13Aug 20, 2025Updated last year
- Structure-aware fine-tuning of protein language models for joint prediction of multiple developability properties from protein structure …☆41Jul 5, 2026Updated 2 months ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆22Sep 18, 2026Updated last week
- ☆19Nov 22, 2022Updated 3 years ago
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- ☆24Jul 27, 2026Updated 2 months ago
- OCTAVVS: Open Chemometrics Toolbox for Analysis and Visualization of Vibrational Spectroscopy data☆16Jan 28, 2026Updated 8 months ago
- ☆30Nov 6, 2022Updated 3 years ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Apr 3, 2022Updated 4 years ago
- the public repo for stats205 scribe notes at Stanford University☆14Jun 10, 2021Updated 5 years ago
- Collective variables by artificial neural networks☆11Mar 16, 2022Updated 4 years ago