Alternatives and similar repositories for funnel:

Users that are interested in funnel are comparing it to the libraries listed below

• ga4gh / task-execution-schemas
  ☆83Updated last month
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆83Updated 6 months ago
• VertebrateResequencing / wr
  High performance Workflow Runner
  ☆30Updated this week
• MG-RAST / AWE
  workflow and resource management system for bioinformatics data analysis
  ☆69Updated 4 years ago
• grailbio / bio
  Bioinformatic infrastructure libraries
  ☆78Updated 4 years ago
• biogo / hts
  biogo high throughput sequencing repository
  ☆126Updated last year
• martian-lang / martian
  Language and framework for high performance computational pipelines.
  ☆148Updated last month
• shenwei356 / bio
  A lightweight and high-performance bioinformatics package in Golang
  ☆93Updated 7 months ago
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 5 years ago
• rabix / bunny
  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
  ☆74Updated 4 years ago
• brentp / irelate
  Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang
  ☆47Updated 4 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆31Updated 5 months ago
• otiai10 / cwl.go
  CWL (and input file) parser for Golang, used by github.com/otiai10/yacle
  ☆22Updated 6 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated this week
• elixir-cloud-aai / TESK
  GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
  ☆41Updated 3 months ago
• dgruber / drmaa
  Compute cluster (HPC) job submission library for Go (#golang) based on the open DRMAA standard.
  ☆49Updated 9 months ago
• bmeg / grip
  Graph Integration Platform
  ☆25Updated this week
• ohsu-comp-bio / cwl-tes
  cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
  ☆18Updated 2 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆125Updated this week
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆61Updated 6 years ago
• pcingola / BigDataScript
  BigDataScript: Scirpting language for big data
  ☆92Updated 4 years ago
• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆188Updated this week
• ga4gh / htsget-refserver
  Reference server implementation for the GA4GH HTSget API standard.
  ☆12Updated last year
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆61Updated 3 weeks ago
• Intel-HLS / GenomicsDB
  GenomicsDB
  ☆111Updated 2 years ago
• wormtable / wormtable
  Write-once-read-many table for large datasets.
  ☆27Updated last year
• GenomicsDB / GenomicsDB
  High performance data storage for importing, querying and transforming variants.
  ☆98Updated 3 weeks ago