sapporo-wes / sapporo
A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.
☆19Updated 2 years ago
Alternatives and similar repositories for sapporo:
Users that are interested in sapporo are comparing it to the libraries listed below
- Common Workflow Language definition files for workflows introduced in DAT2☆11Updated 2 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆22Updated last month
- Trigger CWL workflows via GA4GH WES and TES☆16Updated last month
- Accumulating container resource usage with workflow metadata☆19Updated 3 years ago
- ☆32Updated this week
- a place for GA4GH-related wiki pages☆16Updated 7 years ago
- Common Workflow Language tools and workflows by Pitagora-Network☆33Updated 2 years ago
- ☆11Updated 2 years ago
- Workflow Execution Service Backend☆18Updated last week
- Registration of Galaxy Tools in Elixir☆12Updated 6 years ago
- Generating tool descriptors from bio.tools☆9Updated 6 years ago
- CLI tool to verify workflow reproducibility☆16Updated last year
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆15Updated 2 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆9Updated this week
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆24Updated 3 years ago
- Python utilities for CWL☆39Updated this week
- APIs for discovering genomics tools, their metadata and their containers☆31Updated 4 months ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 3 months ago
- A fast tool to convert BioJS components into Galaxy visualization plugins.☆14Updated 4 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆42Updated last year
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- Convert CWL to WDL☆17Updated 8 years ago
- About Workflow related meetup☆14Updated 2 months ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆77Updated 7 months ago
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆32Updated this week
- Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)☆14Updated 4 years ago
- The WES API is a standard way to run and manage portable workflows.☆83Updated 5 months ago
- Testing building mulled containers for multi-requirement tools.☆71Updated this week
- CWL based Bioinformatics Workflows☆16Updated 3 weeks ago