A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification and a web application for managing and executing those WES services.
☆22Nov 7, 2022Updated 3 years ago
Alternatives and similar repositories for sapporo
Users that are interested in sapporo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- ☆11Apr 22, 2022Updated 4 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆25Aug 11, 2026Updated 3 weeks ago
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- Trigger CWL workflows via GA4GH WES and TES☆18Jul 22, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- About Workflow related meetup☆14Dec 4, 2024Updated last year
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17May 5, 2026Updated 4 months ago
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago
- This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…☆25Jul 6, 2021Updated 5 years ago
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- Generic SDK and CLI for GA4GH API services☆15Feb 2, 2026Updated 7 months ago
- Welcome page and service overview☆18Mar 29, 2023Updated 3 years ago
- TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used togeth…☆12Aug 28, 2026Updated last week
- Python utilities for CWL☆43Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Convert CWL to WDL☆17Oct 17, 2016Updated 9 years ago
- [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute☆18Sep 29, 2023Updated 2 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Jul 6, 2021Updated 5 years ago
- The minimum and most straightforward way to check if command exists and where the executable is, without spawning child_process.☆64Feb 14, 2026Updated 6 months ago
- APIs for discovering genomics tools, their metadata and their containers☆35Mar 28, 2026Updated 5 months ago
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆50Jul 23, 2026Updated last month
- A novel composable rootless container system☆44Jun 8, 2022Updated 4 years ago
- ☆33Aug 24, 2026Updated 2 weeks ago
- Literate Computing for Reproducible Infrastructure - Elasticsearch Practice☆21May 11, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- Dockerfile for Literate Computing(for Reproducible Infrastructure)☆22Jun 11, 2026Updated 2 months ago
- OBF Google Summer of Code☆21Jan 21, 2025Updated last year
- The WES API is a standard way to run and manage portable workflows.☆94Jun 11, 2026Updated 2 months ago
- ☆13Aug 14, 2018Updated 8 years ago
- Typescript data model for Common Workflow Language☆52Mar 3, 2023Updated 3 years ago
- Common Workflow Language tools and workflows by Pitagora-Network☆32Nov 8, 2022Updated 3 years ago
- Literate Computing for Reproducible Infrastructure - Hadoop Practice☆11Mar 5, 2026Updated 6 months ago
- Jupyter wrapper kernel that logs all cell outputs to files with history tracking☆10Aug 5, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Infer metadata for your downstream analysis straight from your RNA-Seq data☆15Nov 20, 2024Updated last year
- a place for GA4GH-related wiki pages☆17Aug 3, 2017Updated 9 years ago
- A tool for checking the validity of JSON-LD objects☆14Sep 29, 2023Updated 2 years ago
- Java SDK for the Common Workflow Language standards☆16Updated this week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆81Mar 25, 2025Updated last year
- Profile for provenance research object of a CWL workflow run☆20Dec 20, 2022Updated 3 years ago
- 塩基配列を高速に検索するウェブサービス☆18Mar 31, 2026Updated 5 months ago