Alternatives and similar repositories for sapporo

Users that are interested in sapporo are comparing it to the libraries listed below

• pitagora-network / DAT2-cwl
  Common Workflow Language definition files for workflows introduced in DAT2
  ☆11Updated 3 years ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆24Updated 3 months ago
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 9 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆78Updated 7 months ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 8 years ago
• C3BI-pasteur-fr / ReGaTE
  Registration of Galaxy Tools in Elixir
  ☆12Updated 6 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆32Updated 2 months ago
• elixir-cloud-aai / cwl-WES
  Trigger CWL workflows via GA4GH WES and TES
  ☆17Updated last week
• inab / WfExS-backend
  Workflow Execution Service Backend
  ☆20Updated this week
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• ddbj / human-reseq
  ☆11Updated 3 years ago
• biojs / biojs2galaxy
  A fast tool to convert BioJS components into Galaxy visualization plugins.
  ☆14Updated 5 years ago
• bio-tools / ToolDog
  Generating tool descriptors from bio.tools
  ☆10Updated 7 years ago
• ASaiM / framework
  Open-source opinionated Galaxy-based framework for microbiota analysis
  ☆14Updated 4 years ago
• NCI-GDC / gdc-dnaseq-cwl
  CWL for GDC DNASeq workflows
  ☆23Updated 3 months ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆85Updated last week
• pubseq / bh20-seq-resource
  Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis
  ☆13Updated 3 years ago
• common-workflow-lab / ipython2cwl
  IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
  ☆17Updated 3 weeks ago
• elixir-europe / BioHackathon-projects-2019
  This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage proje…
  ☆24Updated 4 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆101Updated last month
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆60Updated last week
• workflow-meetup-jp / workflow-meetup
  About Workflow related meetup
  ☆14Updated 10 months ago
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆96Updated last week
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated 5 months ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 11 months ago
• IFB-ElixirFr / ReproHackathon
  Série de hackathons pour la reproductibilité - Une action MaDICS ReproVirtuFlow
  ☆12Updated 5 years ago