A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification.
☆25Aug 11, 2026Updated 3 weeks ago
Alternatives and similar repositories for sapporo-service
Users that are interested in sapporo-service are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆22Nov 7, 2022Updated 3 years ago
- Generic SDK and CLI for GA4GH API services☆15Feb 2, 2026Updated 7 months ago
- Workflow Execution Service Backend☆21Sep 1, 2026Updated last week
- Imputation pipeline for Open Humans☆18Aug 31, 2026Updated last week
- Accumulating container resource usage with workflow metadata☆19Mar 17, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆13Aug 11, 2026Updated 3 weeks ago
- Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletion…☆26Apr 25, 2018Updated 8 years ago
- NGS perl modules☆10Updated this week
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17May 5, 2026Updated 4 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Dec 8, 2020Updated 5 years ago
- The WES API is a standard way to run and manage portable workflows.☆94Jun 11, 2026Updated 2 months ago
- Framework for testing CWL tools and workflows☆20Updated this week
- Typescript data model for Common Workflow Language☆52Mar 3, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- Immune response signatures in cancer☆12May 22, 2019Updated 7 years ago
- ☆13Jan 23, 2020Updated 6 years ago
- A tool for checking the validity of JSON-LD objects☆14Sep 29, 2023Updated 2 years ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- A new open source tool to run CWL workflows on LSF☆37Nov 24, 2022Updated 3 years ago
- Validation and processing of GENIE files☆15Jun 19, 2026Updated 2 months ago
- APIs for discovering genomics tools, their metadata and their containers☆35Mar 28, 2026Updated 5 months ago
- Python OncoPrint library based on Matplotlib☆29Sep 23, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 4 years ago
- genomic relatedness detection pipeline☆32Jan 25, 2024Updated 2 years ago
- A crate for working with the Task Execution Service (TES) specification.☆13Jul 22, 2026Updated last month
- Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-C…☆31May 17, 2026Updated 3 months ago
- Overview of GDC Harmonization Workflows☆43May 5, 2026Updated 4 months ago
- Scripts to reproduce TrioBinning manuscript☆18Mar 31, 2020Updated 6 years ago
- IP-based software loading tool for the Sega Dreamcast☆12Jul 28, 2016Updated 10 years ago
- Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)☆12Aug 6, 2023Updated 3 years ago
- ☆13Apr 2, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ngshmmalign is a profile HMM aligner for NGS reads designed particularly for small genomes (such as those of RNA viruses like HIV-1 and H…☆10May 3, 2018Updated 8 years ago
- Script for parsing and displaying node status information of the HPC Sapelo2 at UGA.☆12Nov 9, 2020Updated 5 years ago
- Paint genomes with taxa-specific k-mer probabilities☆16Apr 4, 2022Updated 4 years ago
- Java SDK for the Common Workflow Language standards☆16Updated this week
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆50Jul 23, 2026Updated last month
- ☆17Feb 29, 2024Updated 2 years ago
- A Nim wrapper for the Spotify Web API☆12Sep 25, 2022Updated 3 years ago