A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specification.
☆25Nov 2, 2026Updated this week
Alternatives and similar repositories for sapporo-service
Users that are interested in sapporo-service are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Nov 7, 2022Updated 4 years ago
- Generic SDK and CLI for GA4GH API services☆15Updated this week
- Workflow Execution Service Backend☆21Oct 26, 2026Updated last week
- Imputation pipeline for Open Humans☆18Updated this week
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆13Aug 11, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.☆17May 5, 2026Updated 6 months ago
- Fast, efficient, lossless compression of fastq files☆14Jan 4, 2021Updated 5 years ago
- The WES API is a standard way to run and manage portable workflows.☆93Jun 11, 2026Updated 4 months ago
- Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletion…☆26Apr 25, 2018Updated 8 years ago
- Typescript data model for Common Workflow Language☆52Mar 3, 2023Updated 3 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆20Dec 8, 2020Updated 5 years ago
- Libraries and command-line utilities for big data genomic analysis☆10Feb 27, 2024Updated 2 years ago
- Trigger CWL workflows via GA4GH WES and TES☆18Updated this week
- Framework for testing CWL tools and workflows☆20Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Yet Another CWL Engine by Golang☆18Mar 19, 2019Updated 7 years ago
- ☆13Jan 23, 2020Updated 6 years ago
- Python bindings to bwa mem☆33Mar 26, 2020Updated 6 years ago
- Variant to disease dataset workflows for Open Targets Genetics☆14May 11, 2026Updated 5 months ago
- A tool for creating resource prediction models for scientific workflows☆13Feb 27, 2024Updated 2 years ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- A tool for checking the validity of JSON-LD objects☆14Sep 29, 2023Updated 3 years ago
- An attempt to help anyone interested in using Perl for Bioinformatics☆36Dec 4, 2019Updated 6 years ago
- Java SDK for the Common Workflow Language standards☆16Oct 30, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 4 years ago
- genomic relatedness detection pipeline☆32Jan 25, 2024Updated 2 years ago
- Tools for working with RDF from Croissant JSON-LD resources☆11Mar 17, 2025Updated last year
- Converts 'MultiQC' Reports into Tidy Data Frames☆18Apr 1, 2024Updated 2 years ago
- NLP pipeline software using common workflow language☆34Apr 22, 2019Updated 7 years ago
- APIs for discovering genomics tools, their metadata and their containers☆35Oct 18, 2026Updated 2 weeks ago
- Official repository for the SENA-discrepancy-VAE model.☆10Aug 20, 2025Updated last year
- A crate for working with the Task Execution Service (TES) specification.☆13Oct 1, 2026Updated last month
- Deep learning-based structural variant filtering method☆40Nov 19, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-C…☆31Updated this week
- A new open source tool to run CWL workflows on LSF☆37Nov 24, 2022Updated 3 years ago
- A community menagarie of automated variant validations using bcbio and the Common Workflow Language☆21Nov 3, 2021Updated 5 years ago
- Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis☆13Sep 21, 2022Updated 4 years ago
- Funnel is a toolkit for distributed task execution via a simple, standard API.☆143Updated this week
- Synapse MCP Server☆11Oct 20, 2025Updated last year
- Overview of GDC Harmonization Workflows☆43May 5, 2026Updated 6 months ago