Alternatives and similar repositories for galaxy-beta1

Users that are interested in galaxy-beta1 are comparing it to the libraries listed below

• galaxyproject / cargo-port
  cache packages permanently
  ☆15Updated last year
• galaxyproject / galaxy-lib
  Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.
  ☆12Updated 5 years ago
• fls-bioinformatics-core / galaxy-tools
  FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.
  ☆14Updated last year
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 7 years ago
• brentp / geneimpacts
  prioritize effects of variant annotations from VEP, SnpEff, et al.
  ☆34Updated 9 months ago
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• goeckslab / isoseq-browser
  ☆13Updated 8 years ago
• Clinical-Genomics / chanjo
  Chanjo provides a better way to analyze coverage data in clinical sequencing.
  ☆51Updated 9 months ago
• nsoranzo / bioblend-tutorial
  ☆12Updated 3 years ago
• karel-brinda / smbl
  SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.
  ☆23Updated 8 years ago
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 8 years ago
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 5 years ago
• BenLangmead / qtip
  Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities
  ☆25Updated 5 years ago
• medvedevgroup / varmatch
  robust matching of small variant datasets using flexible scoring schemes
  ☆11Updated 5 years ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• DecodeGenetics / BamHash
  ☆36Updated 5 years ago
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆28Updated 2 months ago
• bioboxes / rfc
  Request for comments on interchangeable bioinformatics containers
  ☆39Updated 6 years ago
• PanosFirmpas / bamToBigWig
  Directly create a bigwig file with signal derived from a sorted and indexed bam file.
  ☆11Updated 8 years ago
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆18Updated 6 years ago
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆35Updated 2 years ago
• evoldoers / wtfgenes
  What's The Function of these genes?
  ☆22Updated 8 years ago
• markrobinsonuzh / CrispRVariants
  ☆25Updated 4 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• blachlylab / mucor
  ☆12Updated 8 years ago
• refresh-bio / GTC
  GenoTypes Compressor
  ☆16Updated 3 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last month
• tseemann / homebrew-bioinformatics-linux
  Homebrew formulae for bioinformatics software only available for Linux
  ☆27Updated 6 years ago