Alternatives and similar repositories for data-repository-service-schemas

Users that are interested in data-repository-service-schemas are comparing it to the libraries listed below

• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆61Updated last week
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆94Updated this week
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 8 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆102Updated 2 months ago
• Illumina / interop
  C++ Library to parse Illumina InterOp files
  ☆79Updated 2 weeks ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆88Updated last week
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆71Updated last month
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆78Updated 8 months ago
• broadinstitute / cromshell
  CLI for interacting with Cromwell servers
  ☆55Updated last year
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆86Updated last month
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆63Updated last week
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆25Updated last week
• elixir-cloud-aai / cwl-WES
  Trigger CWL workflows via GA4GH WES and TES
  ☆17Updated last week
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆47Updated last month
• ga4gh / task-execution-schemas
  ☆92Updated last week
• Clinical-Genomics / genmod
  Annotate models of genetic inheritance patterns in variant files (vcf files)
  ☆84Updated 3 months ago
• varfish-org / varfish-server
  VarFish: comprehensive DNA variant analysis for diagnostics and research
  ☆51Updated this week
• SciLifeLab / Sarek
  Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
  ☆133Updated 5 years ago
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆32Updated 3 months ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆80Updated 3 weeks ago
• clintval / sample-sheet
  Parse Illumina sample sheets with Python
  ☆50Updated last year
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• broadinstitute / gnomad-browser
  Explore gnomAD datasets on the web
  ☆85Updated this week
• stevekm / nextflow-demos
  Example Nextflow pipelines and programming techniques
  ☆106Updated 2 months ago
• CCDG / Pipeline-Standardization
  ☆82Updated 7 years ago
• Clinical-Genomics / scout
  VCF visualization interface
  ☆174Updated this week
• opencb / iva
  Generic Interactive Variant Analysis browser
  ☆29Updated 3 years ago