cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
☆19Mar 2, 2023Updated 3 years ago
Alternatives and similar repositories for cwl-tes
Users that are interested in cwl-tes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Trigger CWL workflows via GA4GH WES and TES☆18Jan 19, 2026Updated 4 months ago
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆50Feb 4, 2026Updated 4 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- Profile for provenance research object of a CWL workflow run☆19Dec 20, 2022Updated 3 years ago
- ☆93Jun 10, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- CWL tools and workflows for GGR☆22Oct 12, 2021Updated 4 years ago
- A tool for creating resource prediction models for scientific workflows☆13Feb 27, 2024Updated 2 years ago
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 5 months ago
- Heterogeneity-incorporating Workflow ApplicationMaster for YARN☆26Oct 31, 2017Updated 8 years ago
- R packaged for Alpine Linux☆10Dec 10, 2017Updated 8 years ago
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- Deprecated☆101Aug 12, 2019Updated 6 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated last month
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Package to extend Airflow functionality with CWL v1.0 support☆12Jun 12, 2019Updated 7 years ago
- robust matching of small variant datasets using flexible scoring schemes☆12Mar 26, 2020Updated 6 years ago
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago
- Nextflow language support for Visual Studio Editor☆37Updated this week
- TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.☆12Jun 26, 2018Updated 7 years ago
- Real time monitor for snakemake☆17May 19, 2026Updated 3 weeks ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 4 years ago
- ☆14Dec 10, 2018Updated 7 years ago
- ☆17Dec 3, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Docker container for Illumina bcl2fastq☆12Aug 7, 2024Updated last year
- JSON Schema validation for JSON-LD files using Schema.org vocabulary.☆23Dec 1, 2022Updated 3 years ago
- ☆32Aug 2, 2022Updated 3 years ago
- Common Workflow Language reference implementation☆371Jun 9, 2026Updated last week
- An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and ot…☆12May 4, 2026Updated last month
- CWL experimental grammar☆11Nov 16, 2025Updated 7 months ago
- Workflows written in common workflow language (CWL)☆14Dec 15, 2018Updated 7 years ago
- ☆11Apr 22, 2022Updated 4 years ago
- High-reproducibility CWL runner powered by Guix☆24May 30, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Minimal docker image for bwa. Not developed any more.☆11Apr 26, 2015Updated 11 years ago
- Yet another LLM command line interface☆16Dec 9, 2024Updated last year
- ALFA: Annotation Landscape for Aligned Reads☆14Jun 30, 2020Updated 5 years ago
- RDF and SPARQL ideas to build on top of [odgi](https://github.com/pangenome/odgi)☆13Mar 20, 2024Updated 2 years ago
- A command-line utility for sending sms-messages☆11Jul 17, 2017Updated 8 years ago
- RNA Fusion Detection and Quantification☆18Oct 31, 2018Updated 7 years ago
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago