PolusAI / nyxusLinks
A fully scalable robust image feature extraction library.
☆24Updated this week
Alternatives and similar repositories for nyxus
Users that are interested in nyxus are comparing it to the libraries listed below
Sorting:
- Visualizing feature measurements on label images in napari☆10Updated 10 months ago
- A 3D interactivity toolbox for napari☆34Updated last month
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- A minimal Python package for reading OME-Zarr (meta)data☆29Updated this week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated last month
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ☆23Updated 3 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated 2 months ago
- Command-line client for Fractal☆46Updated last week
- ☆16Updated 2 years ago
- Use Napari Viewer to display CZI images☆11Updated 3 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated last month
- ilastik plugin for napari☆14Updated last year
- Multiple file format reading directly into napari using pure Python☆36Updated 10 months ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 2 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Process images using SimpleITK in napari☆21Updated last month
- ☆23Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago
- Gamified image segmentation quality estimation☆17Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last month
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 6 months ago
- Pydantic models for OME-NGFF☆23Updated last week
- ☆20Updated last year
- ☆36Updated this week
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- dask empowered fast4dreg☆11Updated 6 months ago
- ☆18Updated last month
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago