Python control of micro-manager for customized data acquisition
☆185Jun 17, 2026Updated last month
Alternatives and similar repositories for pycro-manager
Users that are interested in pycro-manager are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Microscope control and image acquisition integrated with ImageJ☆311Updated this week
- Python bindings for MMCore, Micro-Manager's device control layer☆35Jun 23, 2026Updated 3 weeks ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆79Jul 6, 2026Updated 2 weeks ago
- Pure python/C++ micro-manager ecosystem☆52Jul 6, 2026Updated 2 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A hub to start the next generation of Microscope Control Software☆60Jan 7, 2021Updated 5 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆21Jul 6, 2026Updated 2 weeks ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆87Jul 10, 2026Updated last week
- Pure Python Micro-Manager GUI Application, built on pymmcore-plus☆21Updated this week
- General-purpouse camera capture plugin for data streaming to napari☆26Mar 18, 2024Updated 2 years ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆96Jul 7, 2026Updated last week
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆23Apr 1, 2025Updated last year
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Non-comprehensive list of projects and resources related to open microscopy.☆185Jul 9, 2026Updated last week
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 6 years ago
- Measurement control and analysis for super-resolution localization fluorescence microscopy☆15Feb 6, 2018Updated 8 years ago
- ☆24Sep 13, 2025Updated 10 months ago
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 3 months ago
- Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…☆86Jan 13, 2026Updated 6 months ago
- TensorFlow Deconvolution for Microscopy Data☆93Apr 29, 2022Updated 4 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆178May 14, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73Jul 6, 2026Updated 2 weeks ago
- The python-microscopy environment - an open-source package for light microscopy☆98Updated this week
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆244Apr 24, 2026Updated 2 months ago
- ☆23Mar 26, 2021Updated 5 years ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 7 months ago
- Micro-Manager's device control layer, written in C++☆62Updated this week
- ☆54Apr 20, 2026Updated 3 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆57May 20, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Serial-section automated anatomy extension for ScanImage☆18Jul 8, 2026Updated last week
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 2 years ago
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 7 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆47Updated this week
- An open-source tool for characterizing PSF and FWHM measurements from light-microscopic 2D and 3D images of microspheres.☆18Jun 12, 2026Updated last month
- Place to discuss the future design of a universal microscope hardware interface☆17May 18, 2021Updated 5 years ago
- A set of Qt-based widgets onto the pymmcore-plus model☆21Updated this week