imaris / ImarisWriterLinks
☆38Updated last year
Alternatives and similar repositories for ImarisWriter
Users that are interested in ImarisWriter are comparing it to the libraries listed below
Sorting:
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆69Updated 3 weeks ago
- python tools for BigDataViewer☆22Updated 10 months ago
- ImageJ convenience layer for N5☆17Updated 2 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 6 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Dataset EXploration & Processing☆32Updated 2 years ago
- ☆47Updated last week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆88Updated 2 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆38Updated 2 weeks ago
- Particle tracking by solving linear assignment problem.☆58Updated 2 weeks ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆20Updated 3 weeks ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- Lattice light-sheet post-processing utility.☆29Updated 3 weeks ago
- Use ImageJ functionality from napari☆31Updated last month
- ☆23Updated 4 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 6 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 8 months ago
- Create 3D/4D animations using a natural language-based syntax☆60Updated 4 months ago
- ☆51Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Updated 3 years ago
- ☆13Updated 5 years ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated this week
- my first baby steps with Napari☆10Updated 5 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago