Alternatives and similar repositories for ImarisWriter

Users that are interested in ImarisWriter are comparing it to the libraries listed below

• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 11 months ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆66Updated this week
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• QI2lab / OPM
  Archived: control, reconstruction, and analysis code for oblique plane microscopy.
  ☆22Updated 4 months ago
• neurobiology-ut / PHILOW
  Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets
  ☆26Updated 5 months ago
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 7 months ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆78Updated last month
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆57Updated last week
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated last week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated this week
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated last month
• allen-cell-animated / agave
  ☆49Updated this week
• clEsperanto / CLIc
  GPU-accelerated Image Processing library for C++
  ☆15Updated this week
• royerlab / dexp
  Dataset EXploration & Processing
  ☆32Updated 2 years ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• zoccoler / napari-flim-phasor-plotter
  ☆11Updated last month
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 3 weeks ago
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 3 months ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• abcucberkeley / PetaKit5D
  ☆46Updated this week
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated this week
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 5 years ago
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆19Updated 2 months ago
• rosalindfranklininstitute / RedLionfish
  ☆31Updated last year
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆18Updated 3 months ago
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated 2 weeks ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 5 months ago
• flevet / SR-Tesseler
  ☆13Updated 5 years ago