live-image-tracking-tools / traccuracyLinks
Utilities for computing common accuracy metrics on cell tracking solutions with ground truth
☆36Updated 2 weeks ago
Alternatives and similar repositories for traccuracy
Users that are interested in traccuracy are comparing it to the libraries listed below
Sorting:
- Multi-Object Tracker using Integer Linear Equations☆38Updated 2 weeks ago
- ☆33Updated 5 months ago
- Particle tracking by solving linear assignment problem.☆58Updated 2 weeks ago
- 1d plotting in napari-based canvas.☆26Updated last week
- Affinity based segmentation algorithms and tools☆10Updated 5 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Updated 6 months ago
- ☆23Updated 4 months ago
- Optimize image processing workflows in napari☆18Updated 5 months ago
- ☆41Updated this week
- ☆37Updated 2 months ago
- StarDist plugin for napari☆39Updated last year
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- Main tasks for the Fractal analytics platform☆21Updated last week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Updated 8 months ago
- Use Napari Viewer to display CZI images☆12Updated 3 years ago
- Segment images utilizing pre-trained neural networks as feature extractors☆40Updated last week
- Napari gaming☆17Updated 3 years ago
- A napari plugin for making animations☆90Updated 3 weeks ago
- python tools for BigDataViewer☆22Updated 10 months ago
- Python libraries for loading, running and packaging bioimage.io models☆33Updated this week
- Transformer-based cell tracking for live-cell microscopy☆104Updated 2 weeks ago
- dask empowered fast4dreg☆15Updated 11 months ago
- Track and lineage visualization with btrack and Napari☆46Updated last month
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- Cookiecutter for napari plugins☆72Updated 11 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last week
- ☆19Updated 5 months ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago