lowe-lab-ucl / cnn-annotatorLinks
Annotate microscopy images for CNN classifier
☆11Updated 3 years ago
Alternatives and similar repositories for cnn-annotator
Users that are interested in cnn-annotator are comparing it to the libraries listed below
Sorting:
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆29Updated 5 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- ☆51Updated 5 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Updated 2 years ago
- ☆11Updated last month
- Particle tracking by solving linear assignment problem.☆57Updated this week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- napari plugin for trackastra☆17Updated this week
- ☆13Updated 5 years ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated 2 years ago
- Course on Deep Learning for imaging using PyTorch☆13Updated 3 years ago
- Use Napari Viewer to display CZI images☆12Updated 3 years ago
- ☆15Updated 2 years ago
- python tools for BigDataViewer☆22Updated 9 months ago
- my first baby steps with Napari☆10Updated 5 years ago
- ☆35Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆16Updated 5 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated this week
- ☆15Updated 2 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 10 months ago
- dask empowered fast4dreg☆14Updated 10 months ago
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆52Updated 5 months ago
- A napari plugin to analysis point spread functions.☆13Updated 6 months ago
- 1d plotting in napari-based canvas.☆26Updated this week
- Visualizing feature measurements on label images in napari☆10Updated last year
- Browse your OMERO database from within napari.☆39Updated this week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆84Updated 2 weeks ago