Software for camera acquisition and tracking of particles
☆11Nov 22, 2022Updated 3 years ago
Alternatives and similar repositories for UUTrack
Users that are interested in UUTrack are comparing it to the libraries listed below
Sorting:
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 5 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Designs for 3D printed parts that were developed in the Zhuang Lab.☆11Dec 2, 2020Updated 5 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54May 20, 2024Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated 11 months ago
- AutoPilot library☆15Nov 15, 2016Updated 9 years ago
- Measurement control and analysis for super-resolution localization fluorescence microscopy☆15Feb 6, 2018Updated 8 years ago
- Janelia Workstation☆26Updated this week
- Place to discuss the future design of a universal microscope hardware interface☆15May 18, 2021Updated 4 years ago
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- ☆33Jul 4, 2019Updated 6 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated last year
- This is the course material for the introductory course into Python basics for Data Scientists.☆12Mar 14, 2023Updated 3 years ago
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 10 years ago
- This is the repository for the openSIM project which integrates structured illumination microscopy into the UC2-system.☆12May 25, 2022Updated 3 years ago
- Command line, Python library, Node-Red and more for Sequent Microsystems 8-Relay-Industrial Card☆12Feb 27, 2025Updated last year
- ☆24Jun 15, 2015Updated 10 years ago
- Old academic project for my PhD - no longer maintained by me: fast gaussian and derivative convolutional filters☆10May 1, 2019Updated 6 years ago
- A python script editor plugin for napari☆11Jul 8, 2023Updated 2 years ago
- daoSPIM microscope project: software and hardware☆11Jul 6, 2023Updated 2 years ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆38Sep 29, 2018Updated 7 years ago
- A random maze generator and a micromouse☆12Nov 16, 2015Updated 10 years ago
- SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification☆14Mar 13, 2026Updated last week
- The Fluorescent Protein Database☆78Updated this week
- WIP: generate json reports from pytest runs☆15Nov 14, 2017Updated 8 years ago
- This is a phase retrieval approach for astronomical Shack-Hartmann wavefront sensor.☆11Nov 18, 2021Updated 4 years ago
- Baxter-like robotic arm that can be trained with human hands and a button press.☆17Aug 18, 2022Updated 3 years ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆13Jun 14, 2022Updated 3 years ago
- Materials for Differentiable Imaging works. Advanced Physics Research, 2023; Advanced Devices & Instrumentation, 2025.☆14Mar 3, 2026Updated 2 weeks ago
- This is the complete code of the book Python for the Lab☆12Dec 2, 2024Updated last year
- Adaptive Optics plugin for MicroManager☆12May 23, 2022Updated 3 years ago
- Generate markdown notebooks from ImageJ Macro☆26Mar 17, 2021Updated 5 years ago
- Schema.org Data Models for HTAN☆15Sep 4, 2025Updated 6 months ago
- Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and pe…☆68Feb 14, 2026Updated last month
- Scope2Screen is an open-source web-application for focus+context exploration and annotation of whole-slide, high-plex, tissue images.☆15Jun 1, 2023Updated 2 years ago
- Spectral unmixing of highly mixed multispectral flow and image cytometry data.☆17Mar 15, 2023Updated 3 years ago
- Information driven structured illumination microscopy using noise-controlled image reconstructions☆13Apr 16, 2021Updated 4 years ago
- Fake RPi.GPIO module for testing☆14Dec 19, 2020Updated 5 years ago