Documentation and tutorials worth sharing.
☆10Dec 7, 2022Updated 3 years ago
Alternatives and similar repositories for resources
Users that are interested in resources are comparing it to the libraries listed below
Sorting:
- Analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆12Sep 30, 2024Updated last year
- ☆16Jun 9, 2025Updated 9 months ago
- The Functional Analysis through Hidden Markov Models Software and Server☆14Nov 6, 2014Updated 11 years ago
- To preprocess, quality control and prepare consumer DTC genomes for research☆14Apr 9, 2025Updated 11 months ago
- Data for analysis of the MoTrPAC endurance exercise training study in 6-month-old rats☆16Aug 13, 2025Updated 7 months ago
- [deprecated] P-value adjustment methods for multiple testing correction☆16Nov 25, 2016Updated 9 years ago
- GenePert: Leveraging GenePT Embeddings for Gene Perturbation Prediction☆22Oct 29, 2024Updated last year
- Materials related to events I might attend, and to talks I am giving☆24Oct 27, 2025Updated 4 months ago
- This is the repository for the Python based program for automated deep phenotype analysis of clinical information using large language mo…☆27Sep 30, 2025Updated 5 months ago
- Subclonal Hierarchy Inference from Somatic Mutations☆21Feb 25, 2025Updated last year
- A repository of real-world data challenges faced by organizations used for project-based learning☆18Jun 1, 2015Updated 10 years ago
- Explore, compare, and evaluate Bioconductor packages related to genomic copy number analysis☆21Mar 15, 2023Updated 3 years ago
- Integrated copy number variation detection toolset☆26Feb 12, 2020Updated 6 years ago
- Collection of layers that can perform arithmetic operations☆12Aug 17, 2021Updated 4 years ago
- Task-based gene regulatory network inference using single-cell or bulk gene expression data conditioned on a prior network.☆54Jul 8, 2024Updated last year
- Main site for DSSG Training 2015☆10Jul 29, 2015Updated 10 years ago
- Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approach☆29Mar 25, 2019Updated 6 years ago
- Galaxy container for single cell RNA-Seq tertiary analysis tools☆18Jun 26, 2025Updated 8 months ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Aug 12, 2020Updated 5 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆44Sep 20, 2024Updated last year
- Extract, transform, and analyze bibliographic data from Wikidata dumps☆28Mar 5, 2023Updated 3 years ago
- Single-cell Scalable Visualization and Analytics☆27Mar 26, 2019Updated 6 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- DEPRECATED & Materials Moved: This sprint was to focus on brainstorming for the Joint Roadmap for Open Science Tools.☆24Sep 18, 2018Updated 7 years ago
- ☆34Updated this week
- Analysis and visualization of top GitHub repositories☆97May 6, 2013Updated 12 years ago
- Generic methods, types and modules for the BioJulia ecosystem.☆12Jul 11, 2024Updated last year
- vIPer: a new tool for IPython notebooks.☆60Jan 7, 2015Updated 11 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Aug 3, 2024Updated last year
- Images for Saturn Cloud☆12Dec 18, 2025Updated 3 months ago
- A little demo how to bind an advanced data science algorithms to 4 different languages☆10Nov 6, 2018Updated 7 years ago
- ☆13Apr 5, 2024Updated last year
- Datastores for reads, not your papa's FASTQ files.☆11Jul 28, 2023Updated 2 years ago
- R markdown format and template for light-on-dark beamer presentations—with fussy extras.☆12Nov 1, 2021Updated 4 years ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆77Jan 23, 2026Updated last month
- Easily download publicly available GWAS summary statistics.☆78Dec 3, 2023Updated 2 years ago
- A performant, 100% native-julia MD5 implementation☆20Jan 5, 2024Updated 2 years ago
- Bloom filters in Julia☆18Jul 11, 2019Updated 6 years ago
- Inference on marginal distributions using gradient-based optimization☆13Mar 27, 2017Updated 8 years ago