nicolerg / resourcesLinks
Documentation and tutorials worth sharing.
☆10Updated 3 years ago
Alternatives and similar repositories for resources
Users that are interested in resources are comparing it to the libraries listed below
Sorting:
- ☆12Updated 7 years ago
- AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation☆14Updated 5 years ago
- We have moved to https://github.com/limix/limix.☆23Updated 8 years ago
- Fast Inference of Networks from Directed Regulations☆22Updated 2 years ago
- Variant impact phenotyping using Perturb-seq☆10Updated last year
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Updated 8 years ago
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆15Updated 9 months ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Updated last month
- "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy☆33Updated 5 years ago
- This repository is retired software☆13Updated 10 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Updated 8 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆15Updated 2 years ago
- Analaysis for the batch correction paper☆12Updated 7 months ago
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Updated 7 years ago
- ☆12Updated 5 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated 2 years ago
- Contrastive Poisson latent variable models (CPLVMs)☆11Updated 3 years ago
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Updated 5 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆59Updated 3 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- ☆16Updated 3 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Updated 3 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- An R package for adaptive sum of powered score test(ASPU) in genetic association studies.☆12Updated 4 years ago