Alternatives and similar repositories for ncov

Users that are interested in ncov are comparing it to the libraries listed below

• nextstrain / auspice
  Web app for visualizing pathogen evolution
  ☆302Updated 2 weeks ago
• midas-network / COVID-19
  2019 novel coronavirus repository
  ☆629Updated 3 years ago
• beoutbreakprepared / nCoV2019
  Location for summaries and analysis of data related to n-CoV 2019, first reported in Wuhan, China
  ☆651Updated 2 years ago
• hodcroftlab / covariants
  Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
  ☆320Updated this week
• nextstrain / augur
  Pipeline components for real-time phylodynamic analysis
  ☆271Updated this week
• cov-lineages / pangolin
  Software package for assigning SARS-CoV-2 genome sequences to global lineages.
  ☆440Updated 2 months ago
• CDCgov / SARS-CoV-2_Sequencing
  A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
  ☆348Updated 2 years ago
• neherlab / covid19_scenarios
  Models of COVID-19 outbreak trajectories and hospital demand
  ☆1,352Updated 3 years ago
• virtual-biohackathons / covid-19-bh20
  COVID-19 Biohackathon April 5-11 2020
  ☆239Updated 5 years ago
• mrc-ide / covid-sim
  This is the COVID-19 CovidSim microsimulation model developed by the MRC Centre for Global Infectious Disease Analysis hosted at Imperial…
  ☆1,232Updated 2 years ago
• marbl / CHM13
  The complete sequence of a human genome
  ☆982Updated last month
• nextstrain / nextclade
  Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
  ☆243Updated 2 weeks ago
• google / nucleus
  Python and C++ code for reading and writing genomics data.
  ☆794Updated 3 years ago
• covidatlas / coronadatascraper
  COVID-19 Coronavirus data scraped from government and curated data sources.
  ☆364Updated 4 years ago
• COVID19Tracking / covid-tracking-data
  ☆294Updated 2 years ago
• WeileiZeng / Open-Source-COVID-19
  A global collection of Open Source projects during COVID-19
  ☆230Updated 2 years ago
• galaxyproject / SARS-CoV-2
  Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures
  ☆128Updated 2 years ago
• GuangchuangYu / nCov2019
  query stats of infected coronavirus cases
  ☆436Updated 4 years ago
• kblin / ncbi-genome-download
  Scripts to download genomes from the NCBI FTP servers
  ☆1,026Updated last month
• ncbi / datasets
  NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.
  ☆448Updated last week
• stevenliuyi / covid19
  an interactive, animated COVID-19 coronavirus map to track the outbreak over time by country and by region for selected countries
  ☆324Updated 8 months ago
• nextstrain / nextstrain.org
  The Nextstrain website
  ☆96Updated this week
• k-sys / covid-19
  A collection of work related to COVID-19
  ☆1,370Updated 4 years ago
• qiime2 / qiime2
  Source for the QIIME 2 Framework (Q2F).
  ☆511Updated this week
• TheEconomist / us-potus-model
  Code for a dynamic multilevel Bayesian model to predict US presidential elections. Written in R and Stan.
  ☆1,260Updated 4 years ago
• plotly / dash-bio
  Open-source bioinformatics components for Dash
  ☆557Updated 5 months ago
• skovaka / UNCALLED
  Raw nanopore signal mapper that enables real-time targeted sequencing
  ☆527Updated last year
• Edinburgh-Genome-Foundry / DnaFeaturesViewer
  Python library to plot DNA sequence features (e.g. from Genbank files)
  ☆649Updated last month
• BioContainers / containers
  Bioinformatics containers
  ☆744Updated last week
• applied-bioinformatics / An-Introduction-To-Applied-Bioinformatics
  Interactive lessons in bioinformatics.
  ☆853Updated 4 years ago