Alternatives and similar repositories for ncov

Users that are interested in ncov are comparing it to the libraries listed below

• nextstrain / auspice
  Web app for visualizing pathogen evolution
  ☆300Updated this week
• nextstrain / augur
  Pipeline components for real-time phylodynamic analysis
  ☆269Updated this week
• midas-network / COVID-19
  2019 novel coronavirus repository
  ☆632Updated 3 years ago
• CDCgov / SARS-CoV-2_Sequencing
  A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
  ☆348Updated 2 years ago
• beoutbreakprepared / nCoV2019
  Location for summaries and analysis of data related to n-CoV 2019, first reported in Wuhan, China
  ☆654Updated 2 years ago
• cov-lineages / pangolin
  Software package for assigning SARS-CoV-2 genome sequences to global lineages.
  ☆435Updated last month
• WeileiZeng / Open-Source-COVID-19
  A global collection of Open Source projects during COVID-19
  ☆230Updated 2 years ago
• hodcroftlab / covariants
  Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
  ☆320Updated this week
• globalcitizen / 2019-wuhan-coronavirus-data
  2019 Wuhan Coronavirus data (COVID-19 / 2019-nCoV)
  ☆616Updated 5 years ago
• cov-lineages / pango-designation
  Repository for suggesting new lineages that should be added to the current scheme
  ☆1,051Updated this week
• nextstrain / nextstrain.org
  The Nextstrain website
  ☆96Updated this week
• marbl / CHM13
  The complete sequence of a human genome
  ☆957Updated 5 months ago
• reichlab / covid19-forecast-hub
  Projections of COVID-19, in standardized format
  ☆453Updated 5 months ago
• sars-cov-2-variants / lineage-proposals
  Repository to propose and discuss lineages
  ☆49Updated last week
• TheEconomist / covid-19-excess-deaths-tracker
  Source code and data for The Economist's covid-19 excess deaths tracker
  ☆642Updated this week
• neherlab / covid19_scenarios
  Models of COVID-19 outbreak trajectories and hospital demand
  ☆1,355Updated 3 years ago
• nextstrain / nextclade
  Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
  ☆231Updated this week
• galaxyproject / SARS-CoV-2
  Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures
  ☆128Updated 2 years ago
• COVID19Tracking / covid-tracking-data
  ☆295Updated 2 years ago
• k-sys / covid-19
  A collection of work related to COVID-19
  ☆1,371Updated 4 years ago
• covidatlas / coronadatascraper
  COVID-19 Coronavirus data scraped from government and curated data sources.
  ☆364Updated 3 years ago
• soroushchehresa / awesome-coronavirus
  🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)
  ☆1,570Updated last year
• GuangchuangYu / nCov2019
  query stats of infected coronavirus cases
  ☆436Updated 3 years ago
• ryansmcgee / seirsplus
  Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distanc…
  ☆668Updated 2 years ago
• youyanggu / covid19_projections
  COVID-19 Projections Using Machine Learning
  ☆367Updated 3 years ago
• samtools / hts-specs
  Specifications of SAM/BAM and related high-throughput sequencing file formats
  ☆674Updated last month
• skovaka / UNCALLED
  Raw nanopore signal mapper that enables real-time targeted sequencing
  ☆527Updated last year
• virtual-biohackathons / covid-19-bh20
  COVID-19 Biohackathon April 5-11 2020
  ☆239Updated 4 years ago
• ImperialCollegeLondon / covid19model
  Code for modelling estimated deaths and cases for COVID19.
  ☆943Updated 4 years ago
• open-covid-19 / data
  Daily time-series epidemiology and hospitalization data for all countries, state/province data for 50+ countries and county/municipality …
  ☆281Updated 2 years ago