nextflow-io / nfcamp-tutorialLinks
A tutorial for DLS-2 migration
☆29Updated 5 years ago
Alternatives and similar repositories for nfcamp-tutorial
Users that are interested in nfcamp-tutorial are comparing it to the libraries listed below
Sorting:
- Params validation plugin for Nextflow pipelines☆48Updated 11 months ago
- TIDDIT - structural variant calling☆74Updated 3 months ago
- Web application to collect and visualise data across multiple MultiQC runs.☆97Updated 7 months ago
- This repository hosts a large collection of Nextflow snippets☆57Updated 5 months ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 2 months ago
- A collection of unexpected challenges and learnings with nextflow and nf-core.☆39Updated last year
- Tips for Nextflow and cheatsheet for channel operation☆78Updated 11 months ago
- ☆49Updated 8 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆31Updated this week
- Reference genome resource manager☆75Updated last year
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆44Updated this week
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆48Updated this week
- Fully automated generation of UCSC assembly hubs☆34Updated 9 months ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 5 months ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Updated 8 months ago
- My bioinfo toolbox☆50Updated 5 months ago
- Testing building mulled containers for multi-requirement tools.☆76Updated this week
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 9 months ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆76Updated this week
- Variant Calling Pipeline Using GATK4 and Nextflow☆56Updated 2 years ago
- A collection of command line tools for working with sequencing data☆51Updated last month
- Master of Pores 2☆23Updated 7 months ago
- Analysis pipelines from Oxford Nanopore Technologies' Research Division☆50Updated 4 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated this week
- Scallop is a reference-based transcriptome assembler for RNA-seq☆92Updated 4 years ago
- Structural Variant Index☆75Updated 7 months ago
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆101Updated 5 months ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆75Updated last year
- Mutation Identification Pipeline. Read the latest documentation:☆45Updated last year
- Nextflow pipeline for analysis of direct RNA Nanopore reads☆106Updated 3 weeks ago