Rostlab / ConSurf

Related projects ⓘ

Alternatives and complementary repositories for ConSurf

• KULL-Centre / _2022_functional-sites-cagiada
  ☆20Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated 11 months ago
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆34Updated 4 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆78Updated 8 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆51Updated this week
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆48Updated 4 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆27Updated 8 months ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆33Updated last week
• jafetgado / PyCanal
  Conservation analysis of homologous proteins with Python
  ☆9Updated 3 years ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆37Updated 5 years ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆22Updated last year
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆27Updated last year
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆44Updated last month
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆36Updated 2 months ago
• wrf / pdbcolor
  Python code to color a PDB structure based on parameters from a multiple sequence alignment
  ☆32Updated last year
• cusbg / MolArt
  MOLeculAR structure annoTator
  ☆34Updated last month
• lehner-lab / DMS2structure
  Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019
  ☆17Updated 5 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated 9 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆49Updated 3 months ago
• fjossinet / RNA-Science-Toolbox
  A platform to do RNA science
  ☆27Updated 3 years ago
• beckham-lab / EpHod
  Deep learning prediction of enzyme optimum pH
  ☆25Updated 11 months ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆30Updated last month
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆46Updated 5 months ago
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆30Updated 8 months ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆44Updated 3 months ago
• clairemcwhite / vcmsa
  ☆29Updated last year
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆80Updated 10 months ago
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆33Updated 2 months ago
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆24Updated last week
• mgalardini / pdb2uniprot
  Convert PDB residues to their Uniprot equivalents
  ☆15Updated 4 years ago