Rostlab / ConSurfLinks
Evolutionary conservation estimation of residues or nucleotides
☆56Updated 3 years ago
Alternatives and similar repositories for ConSurf
Users that are interested in ConSurf are comparing it to the libraries listed below
Sorting:
- scripts and facilities for in-silico mutagenesis with FoldX☆65Updated 5 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Fast protein domain structure embedding+search tool☆27Updated 3 months ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆50Updated last month
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 8 months ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Python framework for doing ancestral sequence reconstruction☆42Updated last year
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆33Updated last week
- Conservation analysis of homologous proteins with Python☆13Updated 4 years ago
- Detection of remote homology by comparison of protein language model representations☆59Updated last year
- ColabFold protocol☆57Updated last year
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated last month
- ☆23Updated 2 years ago
- Feature map and function annotation of Proteins☆34Updated last year
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- A tool for protein and protein complex structure prediction.☆29Updated 6 months ago
- MMseqs2 app to run on your workstation or servers☆101Updated last week
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆76Updated 3 months ago
- ☆11Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆121Updated last year
- Rendering protein mutation movies from predicted 3D structures☆20Updated 2 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated 2 weeks ago
- A domain parser for Alphafold models☆46Updated 2 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 3 months ago
- Next generation sequence parameter library for proteins☆37Updated 3 months ago
- DeepECtransformer☆29Updated 2 years ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆52Updated 4 months ago
- Transmembrane proteins predicted through Language Model embeddings☆43Updated 4 months ago