jordisr / cellscapeLinks
Vector graphics cartoons from protein structure
☆49Updated 3 years ago
Alternatives and similar repositories for cellscape
Users that are interested in cellscape are comparing it to the libraries listed below
Sorting:
- Comprehensive Python client for the Uniprot REST API☆51Updated 2 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆30Updated 2 years ago
- Fast protein domain structure embedding+search tool☆25Updated 3 months ago
- Template-based RNA secondary structure visualization☆26Updated 9 months ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Evolutionary conservation estimation of residues or nucleotides☆47Updated 3 years ago
- A PCR primer tool for DNA assembly flows☆33Updated last year
- Code for LazyAF pipeline☆20Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆29Updated last year
- a collection of colabs useful for molecular biology☆31Updated last year
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆35Updated 4 months ago
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- ☆85Updated last year
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆44Updated 3 weeks ago
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆89Updated last year
- A command line tool for rapid visualisation of AlphaFold2 and AlphaFold3 predictions.☆13Updated last month
- Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…☆21Updated 3 months ago
- ☆40Updated 3 years ago
- Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates☆20Updated 9 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Next generation sequence parameter library for proteins☆35Updated last month
- A platform to do RNA science☆27Updated 4 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆69Updated last week
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆58Updated 4 months ago
- Diverse Genomic Embedding Benchmark☆46Updated 5 months ago
- ☆22Updated 2 years ago