Clusters protein chains based on CA distance difference
☆16Mar 18, 2026Updated last week
Alternatives and similar repositories for protein-cluster-conformers
Users that are interested in protein-cluster-conformers are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆18Jun 13, 2025Updated 9 months ago
- ☆16Dec 10, 2024Updated last year
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Feb 12, 2026Updated last month
- Cython implementation of PDB -> DataFrame parsing☆34Dec 23, 2025Updated 3 months ago
- Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides …☆13Feb 25, 2025Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A high performance drop-in replacement for Biotite's PDBFile.☆41May 27, 2025Updated 10 months ago
- SE(3)-equivariant point cloud networks for virtual screening☆24Apr 29, 2023Updated 2 years ago
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆40Sep 27, 2024Updated last year
- ☆27Jul 3, 2024Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Jan 22, 2026Updated 2 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 2 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- ☆12May 3, 2025Updated 10 months ago
- ☆88Nov 18, 2025Updated 4 months ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Oct 2, 2024Updated last year
- ZDOCK predictions and PDB structures in C++ and Python☆14Jan 1, 2024Updated 2 years ago
- ☆11Sep 2, 2024Updated last year
- Binding pocket optimization based on force fields and docking scoring functions☆37Mar 19, 2025Updated last year
- Some notes (cookbook) for pyMol. Protein Crystallography course.☆16Jun 19, 2021Updated 4 years ago
- BINANA (BINding ANAlyzer) analyzes the geometries of predicted ligand poses to identify molecular interactions that contribute to binding…☆24Jun 30, 2025Updated 9 months ago
- ☆34Nov 22, 2023Updated 2 years ago
- A Light-Weight And Interpretable Molecular Docking Model☆25Oct 23, 2024Updated last year
- AlphaFind: Discover structure similarity across the entire known proteome☆25Nov 5, 2025Updated 4 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- ☆14Dec 31, 2024Updated last year
- Energy minimization post-processing used in PoseBusters☆14Apr 4, 2025Updated 11 months ago
- Protein surface topographical mapping tool☆30Aug 17, 2023Updated 2 years ago
- 2D portraits of 3D protein structures☆27Mar 12, 2026Updated 2 weeks ago
- Jupyter Notebooks from book UNDERSTANDING DEEP LEARNING (Prof Simon Prince) that I could solve.☆13Mar 20, 2024Updated 2 years ago
- Python package to manage protein structures and their annotations☆45Mar 18, 2026Updated last week
- ☆12Apr 4, 2025Updated 11 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆56Jan 28, 2026Updated 2 months ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- It's a package for evaluation of predicted poses, right?☆74Updated this week
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆39Jul 25, 2024Updated last year
- A generic mechanism for describing views used in molecular visualizations☆63Mar 1, 2026Updated 3 weeks ago
- Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention☆59Mar 3, 2026Updated 3 weeks ago
- Protein Structure Archiver☆14Sep 10, 2025Updated 6 months ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Sep 27, 2022Updated 3 years ago
- A geometry-complete SE(3)-equivariant perceptron network (GCPNet) for 3D graphs. (Bioinformatics)☆52Apr 20, 2025Updated 11 months ago