ncbi / GeneGPTLinks
Code and data for GeneGPT.
☆420Updated 9 months ago
Alternatives and similar repositories for GeneGPT
Users that are interested in GeneGPT are comparing it to the libraries listed below
Sorting:
- Cell type annotation with local Large Language Models (LLMs) - Ensuring privacy and speed with extensive customized reports☆152Updated last year
- Automated machine learning for analyzing, interpreting, and designing biological sequences☆173Updated 2 years ago
- A guided, intuitive introduction to genomics for software engineers. Curated by the community.☆389Updated last year
- A unifying framework for biomedical research knowledge graphs☆286Updated 2 weeks ago
- ☆607Updated last year
- An AI Agent for Fully Automated Multi-omic Analyses☆217Updated last year
- BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model | NeurIPS '25☆360Updated last month
- a python bioinformatics framework☆168Updated this week
- DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …☆289Updated 3 months ago
- Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena☆757Updated 9 months ago
- CRISPSR-GPT LLM Agent Public Welcome Page☆138Updated 5 months ago
- An awesome repository of community-curated applications of ChatGPT and other LLMs in computational biology☆267Updated last year
- Repository for StripedHyena, a state-of-the-art beyond Transformer architecture☆409Updated last year
- A framework for state-of-the-art pre-trained bio foundation models on genomics and transcriptomics modalities.☆189Updated this week
- ☆308Updated last year
- NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases.☆505Updated this week
- ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov…☆82Updated 3 weeks ago
- The light frontend for BioChatter, in pure Python☆54Updated 2 weeks ago
- Backend library for conversational AI in biomedicine☆196Updated 2 weeks ago
- Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.☆103Updated 8 months ago
- RNA-seq prediction with deep convolutional neural networks.☆225Updated 5 months ago
- Open source implementation of AlphaFold3☆1,033Updated last year
- Foundation Models for Genomics & Transcriptomics☆817Updated 3 weeks ago
- A LLM powered agent for bioinformatics 🤖☆58Updated 8 months ago
- Cell2Sentence: Teaching Large Language Models the Language of Biology☆807Updated 3 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆453Updated last month
- Biological foundation modeling from molecular to genome scale☆1,477Updated 2 months ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆199Updated 6 months ago
- 🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨☆462Updated last month
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆314Updated last week