instadeepai / nucleotide-transformer
🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
☆479Updated last month
Related projects ⓘ
Alternatives and complementary repositories for nucleotide-transformer
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆278Updated 2 months ago
- Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena☆602Updated 5 months ago
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆226Updated this week
- Genomic Pre-trained Network☆191Updated last month
- Benchmarks for classification of genomic sequences☆119Updated 9 months ago
- DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome☆600Updated 8 months ago
- Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch☆431Updated last month
- 🧬 Generative modeling of regulatory DNA sequences with diffusion probabilistic models 💨☆366Updated this week
- ☆519Updated 8 months ago
- RNA foundation model☆208Updated 7 months ago
- Get protein embeddings from protein sequences