Alternatives and similar repositories for seqlike

Users that are interested in seqlike are comparing it to the libraries listed below

• google-research / proteinfer
  Deep networks for protein functional inference
  ☆177Updated 3 months ago
• openvax / mhcflurry
  Peptide-MHC I binding affinity prediction
  ☆215Updated 4 months ago
• jbkinney / logomaker
  Software for the visualization of sequence-function relationships
  ☆203Updated 4 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆103Updated last month
• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆206Updated last week
• eternagame / draw_rna
  Draw RNA secondary structures in python.
  ☆48Updated 3 months ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆286Updated 3 months ago
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆109Updated 4 years ago
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆152Updated 5 months ago
• UCLOrengoGroup / cath-tools
  Protein structure comparison tools such as SSAP and SNAP
  ☆65Updated last year
• boscoh / uniprot
  retrieve protein sequence identifiers and metadata from http://uniprot.org
  ☆68Updated 3 years ago
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆106Updated 5 years ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆86Updated last week
• 1edv / evolution
  This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'
  ☆96Updated 2 years ago
• OATML-Markslab / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆183Updated last year
• BIMSBbioinfo / janggu
  Deep learning infrastructure for genomics
  ☆257Updated 4 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated last year
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆98Updated last year
• Genentech / gReLU
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
  ☆272Updated this week
• Edinburgh-Genome-Foundry / DnaChisel
  A versatile DNA sequence optimizer
  ☆246Updated 5 months ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆154Updated 10 months ago
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆54Updated 6 months ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆75Updated 2 months ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• JBEI / ART
  A machine learning tool to improve the effectiveness of strain engineering in synthetic biology
  ☆58Updated 3 weeks ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆51Updated this week
• kundajelab / bpnet
  Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them
  ☆166Updated 2 weeks ago
• ntranoslab / esm-variants
  ☆80Updated 2 years ago
• zaneveld / full_spectrum_bioinformatics
  An open-access bioinformatics text
  ☆120Updated 2 weeks ago
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆56Updated last year